期刊文献+

猪Hokovirus LAMP检测方法的建立及应用 被引量:2

Development and Application of LAMP Assay for Detection of Porcine Hokovirus
在线阅读 下载PDF
导出
摘要 为提高猪Hokovirus(PHoV)检测的敏感性和简便性,本研究采用环介导等温扩增(LAMP)技术,建立了一种敏感、特异、快速、简便、实用的检测PHoV的技术。针对PHoV VP1/2基因保守区设计4条引物,进行LAMP扩增,对扩增反应进行优化并检测其敏感性和特异性。结果表明,所建立的方法最佳反应时间为60 min,反应温度为65℃,该方法具有良好的特异性,与其它常见动物病毒(PRRSV、PCV2、CSFV、PRV、PPV、JEV)无交叉反应,对PHoV的最低检出量为10拷贝,其敏感性是PCR方法的10倍,且通过加入荧光染料可直接判定结果。研究表明,该方法特异性强、敏感性高,且操作简便、检测成本低、检测时间短,不需要特殊的仪器,本研究建立的LAMP方法可以作为PHoV在临床上的一种检测技术。 In this study,a loop-mediated isothermal amplification (LAMP) assay was developed for the rapid,specific and sensitive detec tion of PHoV.A set of four primers specific for six regions within the PHoV VP1/2 genes was designed by using online software.The result showed that the reaction temperature and time of the method were optimized at 65℃C and 60 min,respectively.The method was highly specific for PHoV,and no cross-reaction was observed with porcine reproductive and respiratory syndrome virus (PRRSV),porcine circovirus type 2 (PCV2),classic swine fever virus (CSFV),pseudorabies virus (PRV),porcine parvovirus (PPV) and Japanese encephalitis virus (JEV).The detection limit was approximately 10 copies per reaction,10 times more sensitive than conventional PCR,and LAMP products were detected by agarose gel electrophoresis or by visual inspection of a color change due to a fluorescent dye.These results indicated that the LAMP assay was a simple,rapid,sensitive and specific method for detecting PHoV,which did not require any specialized equipment and could be used to detect PHoV both in the laboratory and in the field.
出处 《西南农业学报》 CSCD 北大核心 2014年第2期859-863,共5页 Southwest China Journal of Agricultural Sciences
基金 江苏省农业科技自主创新资金[CX(12)3065]
关键词 猪Hokovirus 环介导等温扩增(LAMP) 检测方法 Porcine Hokovirus Loop-mediated isothermal amplification (LAMP) Detection
  • 相关文献

参考文献14

  • 1Adlhoch C,Kaiser M,Ellerbrck H,et al.High prevalence of porcine Hokovirus in German wild boar populations[J].Virol J,2010(7):171.
  • 2Pan Y,Zeng Q,Zhu C,Hua X,et al.Frequency and characterization of porcine Hokovirus (PHoV) in domestic pigs in eastern China[J].Arch Virol,2012,157:1785-1788.
  • 3Li S,Wei Y,Liu J,et al.Preva]ence of porcine Hokovirus and its co-infection with porcine circovirus 2 in China[J].Arch Virol,2013(5).
  • 4Szelei J,Liu K,Li Y,et al.Parvovirus 4-like virus in blood products[J].Emerg Infect Dis,2010,16:561-564.
  • 5Claude M,Fauquet M,Maniloff J,et al.Virus Taxonomy:The Eighth Report of the International Committee on Taxonomy of Viruses[C].Academic Press,2004.
  • 6Huang L,Zhai S,Cheung A,et al.Detection of a novel porcine parvovirus,PPV4,in Chinese swine herds[J].Virol J,2010(7):333.
  • 7Wang F,Wei Y,Zhu C,et al.Novel parvovirus sublineage in the family of Parvoviridae[J].Virus Genes,2010,41:305-308.
  • 8李彬,马俊杰,毛立,温立斌,张雪寒,倪艳秀,周俊明,何孔旺.猪Hokovirus PCR检测方法的建立及其应用[J].中国预防兽医学报,2012,34(2):108-111. 被引量:4
  • 9李彬,杜露平,何孔旺,刘浩飞,温立斌,张雪寒,郭容利,茅爱华,倪艳秀,周俊明,吕立新,俞正玉,王小敏,胡屹屹,祝昊丹,于洋.猪Hokovirus TaqMan荧光定量PCR方法的建立与应用[J].中国预防兽医学报,2013,35(6):460-463. 被引量:1
  • 10Notomi T,Masubuchi H,Yonekawa T,et al.Loop-mediated isothermal amplification of DNA[J].Nucleic Acids Research,2000,28:63.

二级参考文献17

  • 1Cheung A K,Wu Guang,Wang David,et al.Identification and molecular cloning of a novel porcine parvovirus[J].Arch Virol,2010,155:801-806.
  • 2Szelei J,Liu Kai-yu,Li Yi,et al.Parvovirus 4-like virus in blood products[J].Emerg Infect Dis,2010,16:561-564.
  • 3Lau S K,Woo P C,Tse H,et al.Identification of novel porcineand bovine parvoviruses closely related to human parvovirus 4[J].J Gen Virol,2008,89:1840-1848.
  • 4Claude M,Fauquet M,Maniloff J,et al.Virus taxonomy:The eighth report of the international committee on taxonomy of viruses[M].Academic Press,2004.
  • 5Fauquet C M,Fargette D.International committee on taxonomy of viruses and the 3,142 unassigned species[J].Virol J,2005,2:64-69.
  • 6Adlhoch C,Kaiser M,Ellerbrok H,et al.High prevalence of porcine Hokovirus in German wild boar populations[J].Virol J,2010,7:171-178.
  • 7Huang Lv,Zhai Shao-lun,Cheung A K,et al.Detection of a novel porcine parvovirus,PPV4,in Chinese swine herds[J].Virol J,2010,7:333-337.
  • 8Wang Fang,Wei Yong,Zhu Chun,et al.Novel parvovirus sublineage in the family of Parvoviridae[J].Virus Genes,2010,41:305-308.
  • 9Zhai Shao-lun,Yue Cheng,Wei Zu,et al.High prevalence of a novel porcine bocavirus in weanling piglets with respiratory tract symptoms in China[J].Arch Virol,2010,155:1313-1317.
  • 10Zeng Song-ling,Wang Dang,Fang Liu-rong,et al.Complete coding sequences and phylogenetic analysis of porcine bocavirus (PBoV)[J].J Gen Virol,2011,92(4):784-788.

共引文献3

同被引文献29

  • 1申建维,王旭,范春明,孙秀琴,杜万英,万玉梅,彭铁汉,袁玮.多重分子信标环介导等温扩增快速检测耐甲氧西林金黄色葡萄球菌[J].中华医院感染学杂志,2006,16(7):729-733. 被引量:20
  • 2Notomi T, Okayama H, Masubuchi H, et al. Loop- mediated isothermal amplification of DNA[J]. Nucleic Acids Res, 2000, 28 (1): 63.
  • 3Nagamine K, Hase T, Notomi T. Accelerated reaction by loop-mediated isothermal amplification using loop primers[J]. Mol Cell Probes , 2002, 16 (3) : 223-229.
  • 4Thekisoe O M, lnoue N, Kuboki N, et al. Evaluation of loop-mediated isothermal amplification (LAMP), PCR and parasitological tests for detection of Trypanosoma evansi in experimentally infected pigs [J].Vet Parasitoh 2005, 130 (3): 327-330.
  • 5Dukes J P, King D P, Alexandersen S. Novel reverse transcription loop-mediated isothermal amplification for rapid detection of foot-and-mouth disease virus[J].Arch Viroh 2006, 151 (6) : 1093-1106.
  • 6Toriniwa H, Komiya T. Rapid detection and quantification of Japanese encephalitis virus by real-time reverse transcription loop-mediated isothermal amplification[J].Microbiol Immunol, 2006, 50 (5) : 379-387.
  • 7Blomstr6m A L, Hakhverdyan M, Reid S M, et al. A one-step reverse transcriptase loop-mediated isothermal amplification assay for simple and rapid detection of swine vesicular disease virus[J].J Viral Methods, 2008, 147 ( 1 ) : 188-193.
  • 8Chen H T, Zhang J, Sun D H, et al. Rapid detection of porcine circovirus type 2 by loop-mediated isothermal amplification[J].JVirol Methods, 2008, 149 (2) : 264-268.
  • 9Chen H T, Zhang J, Sun D H, et al. Reverse transcription loop-mediated isothermal amplification for the detection of highly pathogenic porcine reproductive and respiratory syndrome virus[J].JVirolMethods, 2008, 153 (2) : 266-268.
  • 10En F X, Wei X, Jian L, et al. Loop-mediated isothermal amplification establishment for detection of pseudorabies virus[J].JVirol Methods, 2008, 151 (1) : 35-39.

引证文献2

二级引证文献18

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部