Tomato(Solanum lycopersicum)is an important fruit and vegetable crop in worldwide.The fertility of tomato reproductive organs can be dramatically decreased when ambient temperatures rise above 35°C,reducing tomat...Tomato(Solanum lycopersicum)is an important fruit and vegetable crop in worldwide.The fertility of tomato reproductive organs can be dramatically decreased when ambient temperatures rise above 35°C,reducing tomato fruit yield.It is necessary to identify transcription factors(TFs)and target genes involved in heat stress response(HSR)signaling cascades in tomato flower buds to improve tomato plant thermotolerance.In this study,we profiled genes expressed in three developmental stages of tomato flower buds.Red and turquoise modules for heat stress(HS)were identified through gene co-expression network analysis,and the genes within these modules were enriched in HS-related pathways.By focusing on the TFs in the two modules,we identified several novel HSR-related TFs,including SlWRKY75,SlMYB117,and SlNAM.Furthermore,homology analysis illustrated a conserved signaling cascade in tomato.Lastly,we identified and experimentally validated four HSF-regulated genes,namely SlGrpE,SlERDJ3A,SlTIL,and SlPOM1,that likely modulate thermotolerance in plants.These results provide a high-resolution atlas of gene expression during tomato flower bud development under HS conditions,which is a valuable resource for uncovering potential regulatory networks associated with the HSR in tomato.展开更多
Unlike most plants, members of the genus Solanum produce cholesterol and use this as a precursor for steroidal glycoalkaloids. The production of the compounds begins as a branch from brassinosteroid biosynthesis, whic...Unlike most plants, members of the genus Solanum produce cholesterol and use this as a precursor for steroidal glycoalkaloids. The production of the compounds begins as a branch from brassinosteroid biosynthesis, which produces cholesterol that is further modified to produce steroidal glycoalkaloids. During the cholesterol biosynthesis pathway, genetic engineering could alter the formation of cholesterol from provitamin D3(7-dehydrocholesterol) and produce vitamin D3. Cholesterol is a precursor for many steroidal glycoalkaloids, including a-tomatine and esculeoside A. Alpha-tomatine is consumed by mammals and it can reduce cholesterol content and improve LDL:HDL ratio. When there is a high a-tomatine content, the fruit will have a bitter flavor, which together with other steroidal glycoalkaloids serving as protective and defensive compounds for tomato against insect, fungal, and bacterial pests. These compounds also affect the rhizosphere bacteria by recruiting beneficial bacteria. One of the steroidal glycoalkaloids, esculeoside A increases while fruit ripening. This review focuses on recent studies that uncovered key reactions of the production of cholesterol and steroidal glycoalkaloids in tomato connecting to human health, fruit flavor, and plant defense and the potential application for tomato crop improvement.展开更多
The cytokinin oxidase/dehydrogenase(CKX)enzyme is essential for controlling thefluctuating levels of endogen-ous cytokinin(CK)and has a significant impact on different aspects of plant growth and development.Nonethe-les...The cytokinin oxidase/dehydrogenase(CKX)enzyme is essential for controlling thefluctuating levels of endogen-ous cytokinin(CK)and has a significant impact on different aspects of plant growth and development.Nonethe-less,there is limited knowledge about CKX genes in tomato(Solanum lycopersicum L.).Here we performed genome-wide identification and analysis of nine SlCKX family members in tomatoes using bioinformatics tools.The results revealed that nine SlCKX genes were unevenly distributed onfive chromosomes(Chr.1,Chr.4,Chr.8,Chr.10,and Chr.12).The amino acid length,isoelectric points,and molecular weight of the nine SlCKX proteins ranged from 453 to 553,5.77 to 8.59,and 51.661 to 62.494 kD,respectively.Subcellular localization analysis indi-cated that SlCKX2 proteins were located in both the vacuole and cytoplasmic matrix;SlCKX3 and SlCKX5 pro-teins were located in the vacuole;and SlCKX1,4,6,7,8,and 9 proteins were located in the cytoplasmic matrix.Furthermore,we observed differences in the gene structures and phylogenetic relationships of SlCKX proteins among different members.SlCKX1-9 were positioned on two out of the three branches of the CKX phylogenetic tree in the multispecies phylogenetic tree construction,revealing their strong conservation within phylogenetic subgroups.Unique patterns of expression of CKX genes were noticed in callus cultures exposed to varying con-centrations of exogenous ZT,suggesting their roles in specific developmental and physiological functions in the regeneration system.These results may facilitate subsequent functional analysis of SlCKX genes and provide valu-able insights for establishing an efficient regeneration system for tomatoes.展开更多
Background:Numerous studies have demonstrated the existence of approximately 7,500 genetic tomato varieties worldwide.Hence,it is crucial to assess the genetic diversity among tomato cultivars.This study aimed to inve...Background:Numerous studies have demonstrated the existence of approximately 7,500 genetic tomato varieties worldwide.Hence,it is crucial to assess the genetic diversity among tomato cultivars.This study aimed to investigate the genetic diversity of selected Iranian tomato cultivars(Solanum lycopersicum)using RAPD and ISSR molecular markers.Method:Ten RAPD primers and ten ISSR primers were employed to assess the genetic diversity among 10 tomato cultivars:Matin,RFT 112,Hirad,Golsar,Raha,Hengam,Hedah,Fasa,JS12,and Emerald.Data analysis involved the UPGMA algorithm and NTYSYSpc software.Results:RAPD analysis revealed close genetic proximity between Fasa and JS12,as well as between Raha and Hadieh.Conversely,the RFT 112,Hengam,Hirad,and Emerald cultivars exhibited significant genetic diversity within this group.ISSR primer analysis identified Hengam as the most diverse variety,while Matin,Emerald,and Vibrid,as well as Raha and JS12,displayed genetic similarities with minimal observed diversity.Furthermore,the overall analysis of the cultivars using RAPD and ISSR markers indicated that Hengam exhibited the highest diversity among all the varieties.Notably,Raha and JS12 demonstrated limited diversity in this analysis.Conclusion:This research demonstrates substantial genetic diversity among the investigated tomato varieties,with Hengam displaying the highest diversity within this group.Furthermore,ISSR markers proved more effective in determining genetic diversity in tomato plants.展开更多
Tomato is a model system for studying fleshy fruit development.After fertilization,cell division and expansion in the pericarp are crucial for fruit development and determine the final fruit size.TKN3 was found to be ...Tomato is a model system for studying fleshy fruit development.After fertilization,cell division and expansion in the pericarp are crucial for fruit development and determine the final fruit size.TKN3 was found to be expressed in the tomato ovary wall/pericarp of zero to two days post-anthesis fruits as a KNOX I class member,but its function in fruit development was elusive.Here,we found that mutations of TKN3 by CRISPR/Cas9 caused fruit developmental defects,and fruit weight was dramatically reduced in the tkn3cr mutant.Histological observation of fruit pericarps revealed that mutation of TKN3 repressed cell expansion after fertilization,leading to flattened cells in the mesocarp and thereby thinner pericarps in red fruits.Moreover,tkn3cr mutants also displayed pleiotropic phenotypes including enlarged leaves and floral organs,indicating conserved functions in meristem maintenance and leaf development.Yeast two-hybrid and BiFC assays further showed that TKN3 could interact with Solyc10g086640(a homolog of Arabidopsis PNY),which has a similar expression pattern as TKN3.Genome-wide identification of genes regulated by TKN3 indicated that the auxin and gibberellin(GA)pathways might mediate the function of TKN3.Our works revealed that TKN3 controls cell expansion in pericarps,and provides new insights into the roles of KNOX proteins in fruit development.展开更多
Organic fertilizers generally come from agricultural co-products. Their valuation is therefore a major issue for sustainable development. The main objective of this study aims to develop an organic fertilizer derived ...Organic fertilizers generally come from agricultural co-products. Their valuation is therefore a major issue for sustainable development. The main objective of this study aims to develop an organic fertilizer derived from moringa leaves and cocoa pod husks that can improve soil quality and plant growth. The experimental design consisted of completely randomized blocks in three repetitions. The experiment was carried out in five treatments: T0: no fertilization, T1: 100% cocoa pods, T2: 75% cocoa pods + 25% Moringa leaves;T3: 50% cocoa pods + 50% Moringa leaves;T4: 25% cocoa pods + 75% Moringa leaves;T5: 100% Moringa leaves. Three doses were applied: 1;2;4 kg/m2. The trial took place over three growing cycles. The results of the soil analysis compared to the control revealed a significant improvement in physicochemical parameters. Variation of pH from (6.1 to 7.2), calcium from (1.4 to 4.13), magnesium from (0.450 to 0.870), potassium from (0.096 to 0.365) cmol+/kg. Carbon and nitrogen were recorded (1.02% to 2.77%) and (0.12% to 2.56%) respectively. The CEC (cation exchange capacity) saw a clear improvement (4.2 to 9.03) cmol+/kg. Concerning the growth parameters, the control plants recorded an average height of (31.19 cm) while those that benefited from the treatments oscillated between (55.51 to 105.57 cm). In terms of production, the best yields are attributed to treatments T3 and T4 with (37.66 t/ha) and (51.176 t/ha) respectively. The T3 and T4 formulations could help improve the fertility of agricultural soils and the yield of market garden products such as eggplant.展开更多
Aim: This study was carried out in order to evaluate the potential of bacteriophages in controlling tomato bacterial wilt disease caused by Ralstonia solanacearum. Study design: A purposive sampling technique was used...Aim: This study was carried out in order to evaluate the potential of bacteriophages in controlling tomato bacterial wilt disease caused by Ralstonia solanacearum. Study design: A purposive sampling technique was used to collect samples from bacterial wilt hot spot tomato growing areas in Kenya. Place and duration of study: The research work was done at Jomo Kenyatta University of Agriculture and Technology, between June 2020 and July 2021. Methodology: Thirty diseased plants and corresponding soil were collected from five counties, Nyeri, Kajiado, Nyandarua, Kiambu and Taita Taveta. Bacteria were isolated and characterized, and then used as hosts to propagate the phages. Tests done were gram stain, oxidation test, potassium hydroxide solubility test, H2S production test catalase test, NaCl test and sugar fermentation test. Molecular analysis and phenotyping were also done in order to identify the bacteria. The bacteriophages were then isolated through a double overlay method using R. solanacearum as the host. They were characterized and assayed in a greenhouse setting to determine their effectiveness in controlling bacterial wilt. Results: Six host bacteria were isolated and all belonged to biovar II. Four phages were observed based on morphology. Upon characterization the phages were stable at 30˚C, PH range between 6 - 7 and tolerance of more than an hour under UV light. In the greenhouse experiment, treatment of plants with bacteriophage prevented wilting after subsequent inoculation with the pathogen. A bacteriophage mix of SN1 and WT1 were used for efficacy tests due to their efficiency in plating and infection. Phage SN1 and WT1 exhibited high lytic activity and relatively high thermotolerance and acid tolerance, thereby showing great potential in the biocontrol of bacterial wilt infection across a variety of conditions. Conclusion: The results obtained in this research show that bacteriophages offer potential for the biocontrol of bacterial wilt.展开更多
The Conservation Agriculture (CA) is a current concept drives to save natural resources for agricultural production based on the minimum soil disturbance or no-tillage, crop rotation and permanent maintenance of straw...The Conservation Agriculture (CA) is a current concept drives to save natural resources for agricultural production based on the minimum soil disturbance or no-tillage, crop rotation and permanent maintenance of straw on soil surface. The increasing in soil density is a problem to achieve great copping yield under CA, so occasional one-time tillage is considered as an alternative to continuous no-tillage. In this way, this experiment was carried out to compare occasional tillage and no-tillage interacting with cover crops in a field established under conservation agriculture. Thus, the experimental treatments were set up by two tillage methods, conventional tillage and no-tillage and two cover crops, white lupin and millet setting in a randomized blocks with split plot design with four replications. The traits evaluated in the research were soil fertility, soil resistance to penetration, soil moisture and tomato agronomic performance. No-tillage was more efficient to preserve soil moisture;however soil fertility, soil resistance to penetration and tomato yield were favored by conventional tillage. Regarding to cover crops white lupin increased the soil K concentration and enhanced the tomato growth. Although occasional tillage had better performance to the soil fertility and tomato yield, we highlighted that CA is the better way to increase soil health and soil and water conservation along the time leading to so desired regenerative agriculture.展开更多
Grafting is an effective technique for increasing the resistance of vegetables to biotic and abiotic stresses.It has been widely applied to produce solanaceous and melon vegetables.Temperature is an important external...Grafting is an effective technique for increasing the resistance of vegetables to biotic and abiotic stresses.It has been widely applied to produce solanaceous and melon vegetables.Temperature is an important external factor affecting graft formation.However,the molecular mechanism by which external ambient temperature affects tomato graft formation remains unclear.In this study,we demonstrated that elevating ambient temperature during grafting to 35℃ for more than 24 h after grafting accelerated vascular reconnection.We generated self-or heterografted combinations between phyB1B2 and pif4 loss-of-function mutant and wild-type plants,and were mutants unresponsive to graft formation at elevated ambient temperature.In addition,elevated ambient temperature induced SlPIF4 expression during grafting.SlPIF4 directly binds the promoters of auxin biosynthesis genes SlYUCCAs and activates their expression.Further investigation revealed auxin accumulation in the graft junction under elevated ambient temperature.The results illuminate the mechanism by which the PHYB-PIF4-auxin module promotes tomato graft formation in response to elevated ambient temperature.展开更多
Photosynthesis is one the most important chemical reaction in plants,and it is the ultimate energy source of any living organisms.The light and dark reactions are two essential phases of photosynthesis.Light reaction ...Photosynthesis is one the most important chemical reaction in plants,and it is the ultimate energy source of any living organisms.The light and dark reactions are two essential phases of photosynthesis.Light reaction harvests light energy to synthesize ATP and NADPH through an electron transport chain,and as well as giving out O_(2);dark reaction fixes CO_(2) into six carbon sugars by utilizing NADPH and energy from ATP.Subsequently,plants convert optical energy into chemical energy for maintaining growth and development through absorbing light energy.Here,firstly,we highlighted the biological importance of photosynthesis,and hormones and metabolites,photosynthetic and regulating enzymes,and signaling components that collectively regulate photosynthesis in tomato.Next,we reviewed the advances in tomato photosynthesis,including two aspects of genetic basis and genetic improvement.Numerous genes regulating tomato photosynthesis are gradually uncovered,and the interaction network among those genes remains to be constructed.Finally,the photosynthesis occurring in fruit of tomato and the relationship between photosynthesis in leaf and fruit were discussed.Leaves and fruits are photosynthate sources and sinks of tomato respectively,and interaction between photosynthesis in leaf and fruit exists.Additionally,future perspectives that needs to be addressed on tomato photosynthesis were proposed.展开更多
Tomato is an important economic crop all over the world.Volatile flavors in tomato fruit are key factors influencing consumer liking and commercial quality.However,the regulatory mechanism controlling the volatile fla...Tomato is an important economic crop all over the world.Volatile flavors in tomato fruit are key factors influencing consumer liking and commercial quality.However,the regulatory mechanism controlling the volatile flavors of tomatoes is still not clear.Here,we integrated the metabolome and transcriptome of the volatile flavors in tomato fruit to explore the regulatory mechanism of volatile flavor formation,using wild and cultivated tomatoes with significant differences in flavors.A total of 35 volatile flavor compounds were identified,based on the solid phase microextraction-gas chromatography-mass spectrometry(SPME-GC-MS).The content of the volatiles,affecting fruit flavor,significantly increased in the transition from breaker to red ripe fruit stage.Moreover,the total content of the volatiles in wild tomatoes was much higher than that in the cultivated tomatoes.The content variations of all volatile flavors were clustered into 10 groups by hierarchical cluster and Pearson coefficient correlation(PCC)analysis.The fruit transcriptome was also patterned into 10 groups,with significant variations both from the mature green to breaker fruit stage and from the breaker to red ripe fruit stage.Combining the metabolome and the transcriptome of the same developmental stage of fruits by co-expression analysis,we found that the expression level of 1182 genes was highly correlated with the content of volatile flavor compounds,thereby constructing two regulatory pathways of important volatile flavors.One pathway is tetrahydrothiazolidine N-hydroxylase(SlTNH1)-dependent,which is regulated by two transcription factors(TFs)from the bHLH and AP2/ERF families,controlling the synthesis of 2-isobutylthiazole in amino acid metabolism.The other is lipoxygenase(Sl LOX)-dependent,which is regulated by one TF from the HD-Zip family,controlling the synthesis of hexanal and(Z)-2-heptenal in fatty acid metabolism.Dual-luciferase assay confirmed the binding of b HLH and AP2/ERF to their structural genes.The findings of this study provide new insights into volatile flavor formation in tomato fruit,which can be useful for tomato flavor improvement.展开更多
CONSTANS(CO)and CONSTANS-LIKE(COL)transcription factors are known to regulate a series of cellular processes,including the transition from vegetative growth to flower development in plants.However,their role in regula...CONSTANS(CO)and CONSTANS-LIKE(COL)transcription factors are known to regulate a series of cellular processes,including the transition from vegetative growth to flower development in plants.However,their role in regulating the fruit chlorophyll content is poorly understood.In this study,SlCOL1,the tomato(Solanum lycopersicum)ortholog of Arabidopsis CONSTANS,was shown to play key roles in controlling fruit chlorophyll.The suppression of SlCOL1 expression led to a reduction in the chlorophyll content of immature green fruit,while the overexpression of SlCOL1 increased it.An analysis of protein-protein interactions indicated that SlCOL1 forms a complex with GOLDEN2-LIKE(GLK2),which promotes the stability of its protein.The overexpression of SlCOL1in the glk2 null mutation background of tomato failed to promote chlorophyll accumulation in the immature green fruit,which suggests that GLK2 is required for the function of SlCOL1 in regulating chlorophyll content.These results shed new light on the mechanisms used by COL1 and GLK2 to regulate fruit development and chlorophyll accumulation in tomato.展开更多
The plant growth process is accompanied by dynamic changes in the microtubules,and the rearrangement of microtubules is regulated by diverse microtubule-associated proteins(MAPs).Plant MAP65s have been exhaustively ch...The plant growth process is accompanied by dynamic changes in the microtubules,and the rearrangement of microtubules is regulated by diverse microtubule-associated proteins(MAPs).Plant MAP65s have been exhaustively characterized in some species,but the information about MAP65 family members in tomato(Solanum lycopersicum)is limited.In this study,nine SlMAP65 family genes were identified in the tomato genome.Then a systematic analysis that considered the physio-chemical properties,evolution,conserved motifs,domains,gene structure,and cis-regulatory elements of SlMAP65 family members was conducted.The family member Sl MAP65-1,which had the highest expression,was knocked out by CRISPR/Cas9.The tomato fruit of slmap65-1 loss of function lines showed an elongated morphology,and the data indicated that SlMAP65-1 is involved in fruit morphogenesis at the early fruit development stage.These results provide new insights for fruit morphogenesis-related research and future functional studies of the SlMAP65 family members in tomato.展开更多
Secondary salinization is a major environmental factor that causes a stress response and growth inhibition in plants in protected agriculture.The positive effect of a low red to far-red light ratio(R:FR)in salt tolera...Secondary salinization is a major environmental factor that causes a stress response and growth inhibition in plants in protected agriculture.The positive effect of a low red to far-red light ratio(R:FR)in salt tolerance through antioxidant defense has been reported,while the underlying model remains obscure.In this study,we used physiological and genetic approaches to investigate the relationship between H_(2)O_(2) signaling and low R:FR-induced salt tolerance and antioxidant capacity in tomato seedlings.This study found that low R:FR treatment with calcium nitrate stress(SL treatment)enhanced the growth of plants and increased the net photosynthetic rate 5 days after stress compared with a higher R:FR ratio and calcium nitrate stress(S treatment).With transcriptomic analysis of tomato leaves at 5 d,compared with CK,most of glutaredoxin genes and antioxidant enzymes were upregulated by S treatment,which were upregulated further by SL treatment.Compared to the S treatment,within 5 days,the H_(2)O_(2) level was increased faster before 24 h and it was slowed down after 24 h by SL treatment,with less H_(2)O_(2) accumulation at 5 d than that of S treatment.The enhancement of gene expression of RBOH genes were also shown at 24 h under SL.It was found that stomatal conductance followed the dynamic change of H_(2)O_(2),with a rapid closure of stomata of a decrease at 3 h and an increase after 9 h in SL treatment compared to S treatment,respectively.There was same trend of stomata opening degrees of tomato leaves observed by optical microscope.However,the inhibitor of H_(2)O_(2) production(DPI pretreatment)weakened the positive effect of low R:FR on the regulation of stomatal movement.In addition,SL treatment increased the antioxidant enzyme activities and proline content and decreased the MDA content as compared to the S treatment,while the enhancement of ROS homeostasis was reduced by the DPI pretreatment.In conclusion,low R:FR improved redox homeostasis and stomatal status under calcium nitrate stress through H_(2)O_(2)signaling,improving the adaptation of tomato seedlings to soil salinization stress.展开更多
The increasing conversion of agricultural land to organic farming requires the development of specifically adapted cultivars.So far,in tomato there is lack of research for selection of germplasm suitable for sustainab...The increasing conversion of agricultural land to organic farming requires the development of specifically adapted cultivars.So far,in tomato there is lack of research for selection of germplasm suitable for sustainable agroecosystems.In this study,we investigated the genotypic and environmental factors affecting the variation of plant,fruits,and root traits in 39 tomato genotypes grown under organic farming conditions.Four independent experiments were conducted in Italy and Spain across two consecutive seasons in 2019 and 2020.For all traits,the factorial linear regression model to estimate the main effects of genotype(G),location(L),year of cultivation(Y)and their interactions,revealed highly significant(P<0.001)variations,with the G factor being largely predominant for most traits.The implementation of the“which-won-where”,“mean performance versus stability”and“discriminative vs representativeness”patterns in the GGE(Genotype plus Genotype by Environment interaction)analysis,allowed the identification of superior cultivars with high stability across the testing environments.Genomic characterization with 30890 high quality SNPs from dd RADseq genotyping analysis,revealed that a specific cluster of cherry tomato accessions were low performing in terms of yield and fruit weight,on the contrary,showed a high content of soluble solids,which in agreement with GGE analysis.Results of this study provide a framework for the potential use of this locally adapted tomato germplasm to address the needs of more sustainable agriculture.展开更多
This study investigated the effects of chlorine-based fertilizers under varying nitrogen solution concentrations in a soilless culture system. The experiment included four nitrogen solution concentration levels, with ...This study investigated the effects of chlorine-based fertilizers under varying nitrogen solution concentrations in a soilless culture system. The experiment included four nitrogen solution concentration levels, with nitrogen concentrations of 6 mmol/L (C1), 12 mmol/L (C2), 18 mmol/L (C3), and 24 mmol/L (C4). Each nutrient concentration level was further divided into four chloride ion treatments (R1, R2, R3, and R4), where 100%, 60%, 33%, and 0% of the NH4+ and K+ ions were derived from NH4Cl and KCl, respectively. The length, surface area and volume of root were significantly higher by 25.3%~136.9%, 40.1%~173.1%, 27.9%~178.0%, respectively, in the R4 treatment than in the R1 and R2 treatments at flowering stage. The aboveground biomass and yield in the R4 treatment were significantly higher, by approximately 15.6%~43.5% and 16.6%~28.6%, respectively, than in the R1, R2, and R3 treatments at the picking stage. The C3 and C4 treatments significantly decreased biomass and yield by 31.9%~50.2% and 20.7%~50.5%, respectively, compared to the C1 and C2 treatments at the picking stage. Besides, the higher nutrient solution increased the incidence of blossom-end rot. In conclusion, high concentrations of chloride ions in nutrient solutions, especially when the Cl− concentration exceeded 10 mmol/L, have been shown to inhibit tomato growth in soilless culture systems. Therefore, replacing sulfur-based fertilizers by chlorine-based fertilizers is not recommended for tomato production under the studied conditions.展开更多
Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modificatio...Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modification on RNA is involved in a diverse range of stress response processes.There is a significant knowledge gap regarding the precise roles of m^(6)A modification in tomato,particularly for cold stress response.Here,we assessed the m^(6)A modification landscape of S.lycopersicum'Micro-Tom'leaves in response to low-temperature stress.Furthermore,we investigated the potential relationship among m^(6)A modification,transcriptional regulation,alternative polyadenylation events,and protein translation via MeRIP-seq,RNA-seq,and protein mass spectrometry.After omic date analysis,11378 and 10735 significant m^(6)A peak associated genes were identified in the control and cold treatment tomato leaves,respectively.Additionally,we observed a UGUACAK(K=G/U)motif under both conditions.Differential m^(6)A site associated genes most likely play roles in protein translation regulatory pathway.Besides directly altering gene expression levels,m^(6)A also leads to differential poly(A)site usage under low-temperature.Finally,24 important candidate genes associated with cold stress were identified by system-level multi-omic analysis.Among them,m^(6)A modification levels were increased in SBPase(Sedoheptulose-1,7-bisphosphatase,Solyc05g052600.4)mRNA,causing distal poly(A)site usage,downregulation of mRNA expression level,and increased protein abundance.Through these,tomato leaves try to maintain normal photo synthetic carbon assimilation and nitro gen metabolism under low-temperature condition.The comprehensive investigation of the m^(6)A modification landscape and multi-omics analysis provide valuable insights into the epigenetic regulatory mechanisms in tomato cold stress response.展开更多
The essential photoprotective role of proton gradient regulation 5(PGR5)-dependent cyclic electron flow(CEF)has been reported in Arabidopsis,rice,and algae.However,its functional assessment has not been performed in t...The essential photoprotective role of proton gradient regulation 5(PGR5)-dependent cyclic electron flow(CEF)has been reported in Arabidopsis,rice,and algae.However,its functional assessment has not been performed in tomato yet.In this study,we focused on elucidate the function of SlPGR5 and SlPGR5-like photosynthetic phenotype 1(PGRL1)in tomato.We performed RNA interference and found that SlPGR5/SlPGRL1-suppressed transformants exhibited extremely low CO_(2)assimilation capacity,their photosystem I(PSI)and PSII were severely photoinhibited and chloroplasts were obviously damaged.The SlPGR5/SlPGRL1-suppressed plants almost completely inhibited CEF and Y(ND),and PSII photoinhibition may be directly related to the inability to produce sufficient proton motive force to induce NPQ.The transgenic plants overexpressing SlPGR5 and SlPGRL1 driven by 35S promoter capable alleviate photoinhibition of plants under low night temperature.The transcriptomic and proteomic analyses suggested that the nuclear gene transcription and turnover of chloroplast proteins,including the plastoglobule-related proteins,were closely related to SlPGR5/SlPGRL1 pathway dependent CEF.The bridge relationship between CEF and chloroplast quality maintenance was a novel report to our knowledge.In conclusion,these results revealed the regulatory mechanism of the SlPGR5/SlPGRL1 pathway in photoprotection and maintenance of chloroplast function in tomato,which is crucial for reduce yield loss,especially under adverse environmental conditions.展开更多
Potassium(K) and magnesium(Mg) levels and their balances are two factors affecting the growth of plant. However, the responses of different crop cultivars to K/Mg ratios are less clear. This study was aimed at assessi...Potassium(K) and magnesium(Mg) levels and their balances are two factors affecting the growth of plant. However, the responses of different crop cultivars to K/Mg ratios are less clear. This study was aimed at assessing the different responses of tomato(Solanum Lycopersicum L.) cultivars to the different K/Mg supply ratios. Three tomato cultivars(Zhongza 9(ZZ), Gailiangmaofen(MF), and Jinpengchaoguan(JP)) were grown in pots with three different K+/Mg2+ratios(4:0, 4:1 and 8:1, represented by K/Mg4:0, K/Mg4:1, and K/Mg8:1, respectively). Compared with K/Mg4:1treatment, the leaf chlorophyll content, net photosynthetic rate, and total biomass of tomato seedlings under K/Mg4:0treatments were decreased by 69.7, 89.1, and 53.1%, respectively. The Mg deficiency symptoms were observed when the Mg content in shoot became lower than 4 mg g–1DW. Compared with K/Mg4:1treatment, total biomass of tomato seedlings of K/Mg8:1treatment was decreased by 21.6%; the shoot and root Mg contents were decreased by 10.4 and 21.8%, respectively; and Mg uptake of tomato was reduced by 34.1%. There were significant differences in biomass and Mg uptake for the three cultivars between the different K+/Mg2+treatments. The Mg uptake of the three different cultivars ranked as ZZ>JP>MF under Mg deficiency and high K condition. In conclusion, the growth and Mg uptake and allocation of tomato were influenced significantly by imbalance K and Mg supply. JP and ZZ were the cultivars with the highest efficiency in Mg uptake.展开更多
A study was conducted to determine the genetic diversity of 39 determinate and indeterminate tomato inbred lines collected from China, Japan, S. Korea, and USA. Using 35 SSR polymorphic markers, a total of 150 alleles...A study was conducted to determine the genetic diversity of 39 determinate and indeterminate tomato inbred lines collected from China, Japan, S. Korea, and USA. Using 35 SSR polymorphic markers, a total of 150 alleles were found with moderate levels of diversity, and a high number of unique alleles existing in these tomato lines. The mean number of alleles per locus was 4.3 and the average polymorphism information content （PIC） was 0.31. Unweighted Pair Group Method with Arithmetic Mean （UPGMA） clustering at genetic similarity value of 0.85 grouped the inbred lines into four groups, where one USA cultivar formed a separate and more distant cluster. The most similar inbred lines are from USA, both with determinate type, whereas the most different lines are from USA （Us-16） and Japan （Ja-2） with determinate and indeterminate growth habit, respectively. Clustering was consistent with the known information regarding geographical location and growth habit. The genetic distance information reported in this study might be used by breeders when planning future crosses among these inbred lines.展开更多
基金supported by grants from the National Natural Science Foundation of China(Grant No.32072571)the 111 Project(Grant No.B17043)the Construction of Beijing Science,and Technology Innovation and Service Capacity in Top Subjects(Grant No.CEFF-PXM2019_014207_000032)。
文摘Tomato(Solanum lycopersicum)is an important fruit and vegetable crop in worldwide.The fertility of tomato reproductive organs can be dramatically decreased when ambient temperatures rise above 35°C,reducing tomato fruit yield.It is necessary to identify transcription factors(TFs)and target genes involved in heat stress response(HSR)signaling cascades in tomato flower buds to improve tomato plant thermotolerance.In this study,we profiled genes expressed in three developmental stages of tomato flower buds.Red and turquoise modules for heat stress(HS)were identified through gene co-expression network analysis,and the genes within these modules were enriched in HS-related pathways.By focusing on the TFs in the two modules,we identified several novel HSR-related TFs,including SlWRKY75,SlMYB117,and SlNAM.Furthermore,homology analysis illustrated a conserved signaling cascade in tomato.Lastly,we identified and experimentally validated four HSF-regulated genes,namely SlGrpE,SlERDJ3A,SlTIL,and SlPOM1,that likely modulate thermotolerance in plants.These results provide a high-resolution atlas of gene expression during tomato flower bud development under HS conditions,which is a valuable resource for uncovering potential regulatory networks associated with the HSR in tomato.
文摘Unlike most plants, members of the genus Solanum produce cholesterol and use this as a precursor for steroidal glycoalkaloids. The production of the compounds begins as a branch from brassinosteroid biosynthesis, which produces cholesterol that is further modified to produce steroidal glycoalkaloids. During the cholesterol biosynthesis pathway, genetic engineering could alter the formation of cholesterol from provitamin D3(7-dehydrocholesterol) and produce vitamin D3. Cholesterol is a precursor for many steroidal glycoalkaloids, including a-tomatine and esculeoside A. Alpha-tomatine is consumed by mammals and it can reduce cholesterol content and improve LDL:HDL ratio. When there is a high a-tomatine content, the fruit will have a bitter flavor, which together with other steroidal glycoalkaloids serving as protective and defensive compounds for tomato against insect, fungal, and bacterial pests. These compounds also affect the rhizosphere bacteria by recruiting beneficial bacteria. One of the steroidal glycoalkaloids, esculeoside A increases while fruit ripening. This review focuses on recent studies that uncovered key reactions of the production of cholesterol and steroidal glycoalkaloids in tomato connecting to human health, fruit flavor, and plant defense and the potential application for tomato crop improvement.
基金funded by the Special Project for Science and Technology Innovation Platform of Fujian Academy of Agricultural Sciences,China(CXPT2023003)the Freely Explore Scientific and Technology Innovation Program of Fujian Academy of Agricultural Sciences(ZYTS202207)the Program for Innovative Research Team of Fujian Academy of Agricultural Sciences,China(CXTD2021006-3)。
文摘The cytokinin oxidase/dehydrogenase(CKX)enzyme is essential for controlling thefluctuating levels of endogen-ous cytokinin(CK)and has a significant impact on different aspects of plant growth and development.Nonethe-less,there is limited knowledge about CKX genes in tomato(Solanum lycopersicum L.).Here we performed genome-wide identification and analysis of nine SlCKX family members in tomatoes using bioinformatics tools.The results revealed that nine SlCKX genes were unevenly distributed onfive chromosomes(Chr.1,Chr.4,Chr.8,Chr.10,and Chr.12).The amino acid length,isoelectric points,and molecular weight of the nine SlCKX proteins ranged from 453 to 553,5.77 to 8.59,and 51.661 to 62.494 kD,respectively.Subcellular localization analysis indi-cated that SlCKX2 proteins were located in both the vacuole and cytoplasmic matrix;SlCKX3 and SlCKX5 pro-teins were located in the vacuole;and SlCKX1,4,6,7,8,and 9 proteins were located in the cytoplasmic matrix.Furthermore,we observed differences in the gene structures and phylogenetic relationships of SlCKX proteins among different members.SlCKX1-9 were positioned on two out of the three branches of the CKX phylogenetic tree in the multispecies phylogenetic tree construction,revealing their strong conservation within phylogenetic subgroups.Unique patterns of expression of CKX genes were noticed in callus cultures exposed to varying con-centrations of exogenous ZT,suggesting their roles in specific developmental and physiological functions in the regeneration system.These results may facilitate subsequent functional analysis of SlCKX genes and provide valu-able insights for establishing an efficient regeneration system for tomatoes.
文摘Background:Numerous studies have demonstrated the existence of approximately 7,500 genetic tomato varieties worldwide.Hence,it is crucial to assess the genetic diversity among tomato cultivars.This study aimed to investigate the genetic diversity of selected Iranian tomato cultivars(Solanum lycopersicum)using RAPD and ISSR molecular markers.Method:Ten RAPD primers and ten ISSR primers were employed to assess the genetic diversity among 10 tomato cultivars:Matin,RFT 112,Hirad,Golsar,Raha,Hengam,Hedah,Fasa,JS12,and Emerald.Data analysis involved the UPGMA algorithm and NTYSYSpc software.Results:RAPD analysis revealed close genetic proximity between Fasa and JS12,as well as between Raha and Hadieh.Conversely,the RFT 112,Hengam,Hirad,and Emerald cultivars exhibited significant genetic diversity within this group.ISSR primer analysis identified Hengam as the most diverse variety,while Matin,Emerald,and Vibrid,as well as Raha and JS12,displayed genetic similarities with minimal observed diversity.Furthermore,the overall analysis of the cultivars using RAPD and ISSR markers indicated that Hengam exhibited the highest diversity among all the varieties.Notably,Raha and JS12 demonstrated limited diversity in this analysis.Conclusion:This research demonstrates substantial genetic diversity among the investigated tomato varieties,with Hengam displaying the highest diversity within this group.Furthermore,ISSR markers proved more effective in determining genetic diversity in tomato plants.
基金supported by The National Key Research and Development Program of China(Grant No.2022YFF1003002)the National Natural Science Foundation of China(Grant No.32120103010)the Project of Yuandu Industry Leading talent。
文摘Tomato is a model system for studying fleshy fruit development.After fertilization,cell division and expansion in the pericarp are crucial for fruit development and determine the final fruit size.TKN3 was found to be expressed in the tomato ovary wall/pericarp of zero to two days post-anthesis fruits as a KNOX I class member,but its function in fruit development was elusive.Here,we found that mutations of TKN3 by CRISPR/Cas9 caused fruit developmental defects,and fruit weight was dramatically reduced in the tkn3cr mutant.Histological observation of fruit pericarps revealed that mutation of TKN3 repressed cell expansion after fertilization,leading to flattened cells in the mesocarp and thereby thinner pericarps in red fruits.Moreover,tkn3cr mutants also displayed pleiotropic phenotypes including enlarged leaves and floral organs,indicating conserved functions in meristem maintenance and leaf development.Yeast two-hybrid and BiFC assays further showed that TKN3 could interact with Solyc10g086640(a homolog of Arabidopsis PNY),which has a similar expression pattern as TKN3.Genome-wide identification of genes regulated by TKN3 indicated that the auxin and gibberellin(GA)pathways might mediate the function of TKN3.Our works revealed that TKN3 controls cell expansion in pericarps,and provides new insights into the roles of KNOX proteins in fruit development.
文摘Organic fertilizers generally come from agricultural co-products. Their valuation is therefore a major issue for sustainable development. The main objective of this study aims to develop an organic fertilizer derived from moringa leaves and cocoa pod husks that can improve soil quality and plant growth. The experimental design consisted of completely randomized blocks in three repetitions. The experiment was carried out in five treatments: T0: no fertilization, T1: 100% cocoa pods, T2: 75% cocoa pods + 25% Moringa leaves;T3: 50% cocoa pods + 50% Moringa leaves;T4: 25% cocoa pods + 75% Moringa leaves;T5: 100% Moringa leaves. Three doses were applied: 1;2;4 kg/m2. The trial took place over three growing cycles. The results of the soil analysis compared to the control revealed a significant improvement in physicochemical parameters. Variation of pH from (6.1 to 7.2), calcium from (1.4 to 4.13), magnesium from (0.450 to 0.870), potassium from (0.096 to 0.365) cmol+/kg. Carbon and nitrogen were recorded (1.02% to 2.77%) and (0.12% to 2.56%) respectively. The CEC (cation exchange capacity) saw a clear improvement (4.2 to 9.03) cmol+/kg. Concerning the growth parameters, the control plants recorded an average height of (31.19 cm) while those that benefited from the treatments oscillated between (55.51 to 105.57 cm). In terms of production, the best yields are attributed to treatments T3 and T4 with (37.66 t/ha) and (51.176 t/ha) respectively. The T3 and T4 formulations could help improve the fertility of agricultural soils and the yield of market garden products such as eggplant.
文摘Aim: This study was carried out in order to evaluate the potential of bacteriophages in controlling tomato bacterial wilt disease caused by Ralstonia solanacearum. Study design: A purposive sampling technique was used to collect samples from bacterial wilt hot spot tomato growing areas in Kenya. Place and duration of study: The research work was done at Jomo Kenyatta University of Agriculture and Technology, between June 2020 and July 2021. Methodology: Thirty diseased plants and corresponding soil were collected from five counties, Nyeri, Kajiado, Nyandarua, Kiambu and Taita Taveta. Bacteria were isolated and characterized, and then used as hosts to propagate the phages. Tests done were gram stain, oxidation test, potassium hydroxide solubility test, H2S production test catalase test, NaCl test and sugar fermentation test. Molecular analysis and phenotyping were also done in order to identify the bacteria. The bacteriophages were then isolated through a double overlay method using R. solanacearum as the host. They were characterized and assayed in a greenhouse setting to determine their effectiveness in controlling bacterial wilt. Results: Six host bacteria were isolated and all belonged to biovar II. Four phages were observed based on morphology. Upon characterization the phages were stable at 30˚C, PH range between 6 - 7 and tolerance of more than an hour under UV light. In the greenhouse experiment, treatment of plants with bacteriophage prevented wilting after subsequent inoculation with the pathogen. A bacteriophage mix of SN1 and WT1 were used for efficacy tests due to their efficiency in plating and infection. Phage SN1 and WT1 exhibited high lytic activity and relatively high thermotolerance and acid tolerance, thereby showing great potential in the biocontrol of bacterial wilt infection across a variety of conditions. Conclusion: The results obtained in this research show that bacteriophages offer potential for the biocontrol of bacterial wilt.
文摘The Conservation Agriculture (CA) is a current concept drives to save natural resources for agricultural production based on the minimum soil disturbance or no-tillage, crop rotation and permanent maintenance of straw on soil surface. The increasing in soil density is a problem to achieve great copping yield under CA, so occasional one-time tillage is considered as an alternative to continuous no-tillage. In this way, this experiment was carried out to compare occasional tillage and no-tillage interacting with cover crops in a field established under conservation agriculture. Thus, the experimental treatments were set up by two tillage methods, conventional tillage and no-tillage and two cover crops, white lupin and millet setting in a randomized blocks with split plot design with four replications. The traits evaluated in the research were soil fertility, soil resistance to penetration, soil moisture and tomato agronomic performance. No-tillage was more efficient to preserve soil moisture;however soil fertility, soil resistance to penetration and tomato yield were favored by conventional tillage. Regarding to cover crops white lupin increased the soil K concentration and enhanced the tomato growth. Although occasional tillage had better performance to the soil fertility and tomato yield, we highlighted that CA is the better way to increase soil health and soil and water conservation along the time leading to so desired regenerative agriculture.
基金supported by China Agriculture Research System of MOF and MARA(Grant No.CARS23-B10)The Major Science and Technology Projects in Hainan Province(Grant No.ZDKJ2021005)+1 种基金Key R&D projects in Shandong Province(Grant No.LJNY202106)Central Public-interest Scientific Institution Basal Research Fund(Grant No.IVF-BRF2023006)。
文摘Grafting is an effective technique for increasing the resistance of vegetables to biotic and abiotic stresses.It has been widely applied to produce solanaceous and melon vegetables.Temperature is an important external factor affecting graft formation.However,the molecular mechanism by which external ambient temperature affects tomato graft formation remains unclear.In this study,we demonstrated that elevating ambient temperature during grafting to 35℃ for more than 24 h after grafting accelerated vascular reconnection.We generated self-or heterografted combinations between phyB1B2 and pif4 loss-of-function mutant and wild-type plants,and were mutants unresponsive to graft formation at elevated ambient temperature.In addition,elevated ambient temperature induced SlPIF4 expression during grafting.SlPIF4 directly binds the promoters of auxin biosynthesis genes SlYUCCAs and activates their expression.Further investigation revealed auxin accumulation in the graft junction under elevated ambient temperature.The results illuminate the mechanism by which the PHYB-PIF4-auxin module promotes tomato graft formation in response to elevated ambient temperature.
基金supported by grants from the National Key Research&Development Plan(Grants Nos.2022YFF10030022022YFD1200502)+7 种基金National Natural Science Foundation of China(Grant Nos.3237269631991182)Wuhan Biological Breeding Major Project(Grant No.2022021302024852)Key Project of Hubei Hongshan Laboratory(2021hszd007)HZAU-AGIS Cooperation Fund(Grant No.SZYJY2023022)Funds for High Quality Development of Hubei Seed Industry(HBZY2023B004)Hubei Agriculture Research System(2023HBSTX4-06)Hubei Key Research&Development Plan(Grants Nos.2022BBA0066,2022BBA0062)。
文摘Photosynthesis is one the most important chemical reaction in plants,and it is the ultimate energy source of any living organisms.The light and dark reactions are two essential phases of photosynthesis.Light reaction harvests light energy to synthesize ATP and NADPH through an electron transport chain,and as well as giving out O_(2);dark reaction fixes CO_(2) into six carbon sugars by utilizing NADPH and energy from ATP.Subsequently,plants convert optical energy into chemical energy for maintaining growth and development through absorbing light energy.Here,firstly,we highlighted the biological importance of photosynthesis,and hormones and metabolites,photosynthetic and regulating enzymes,and signaling components that collectively regulate photosynthesis in tomato.Next,we reviewed the advances in tomato photosynthesis,including two aspects of genetic basis and genetic improvement.Numerous genes regulating tomato photosynthesis are gradually uncovered,and the interaction network among those genes remains to be constructed.Finally,the photosynthesis occurring in fruit of tomato and the relationship between photosynthesis in leaf and fruit were discussed.Leaves and fruits are photosynthate sources and sinks of tomato respectively,and interaction between photosynthesis in leaf and fruit exists.Additionally,future perspectives that needs to be addressed on tomato photosynthesis were proposed.
基金supported by the National Natural Science Foundation of China(Grant Nos.32120103010,32002050)Beijing Joint Research Program for Germplasm Innovation and New Variety Breeding(Grant No.G20220628003-03)the Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences。
文摘Tomato is an important economic crop all over the world.Volatile flavors in tomato fruit are key factors influencing consumer liking and commercial quality.However,the regulatory mechanism controlling the volatile flavors of tomatoes is still not clear.Here,we integrated the metabolome and transcriptome of the volatile flavors in tomato fruit to explore the regulatory mechanism of volatile flavor formation,using wild and cultivated tomatoes with significant differences in flavors.A total of 35 volatile flavor compounds were identified,based on the solid phase microextraction-gas chromatography-mass spectrometry(SPME-GC-MS).The content of the volatiles,affecting fruit flavor,significantly increased in the transition from breaker to red ripe fruit stage.Moreover,the total content of the volatiles in wild tomatoes was much higher than that in the cultivated tomatoes.The content variations of all volatile flavors were clustered into 10 groups by hierarchical cluster and Pearson coefficient correlation(PCC)analysis.The fruit transcriptome was also patterned into 10 groups,with significant variations both from the mature green to breaker fruit stage and from the breaker to red ripe fruit stage.Combining the metabolome and the transcriptome of the same developmental stage of fruits by co-expression analysis,we found that the expression level of 1182 genes was highly correlated with the content of volatile flavor compounds,thereby constructing two regulatory pathways of important volatile flavors.One pathway is tetrahydrothiazolidine N-hydroxylase(SlTNH1)-dependent,which is regulated by two transcription factors(TFs)from the bHLH and AP2/ERF families,controlling the synthesis of 2-isobutylthiazole in amino acid metabolism.The other is lipoxygenase(Sl LOX)-dependent,which is regulated by one TF from the HD-Zip family,controlling the synthesis of hexanal and(Z)-2-heptenal in fatty acid metabolism.Dual-luciferase assay confirmed the binding of b HLH and AP2/ERF to their structural genes.The findings of this study provide new insights into volatile flavor formation in tomato fruit,which can be useful for tomato flavor improvement.
基金supported by grants from the National Natural Science Foundation of China(32360766,32072595 and 32202512)the Earmarked Fund for CARS(CARS-23-A13)。
文摘CONSTANS(CO)and CONSTANS-LIKE(COL)transcription factors are known to regulate a series of cellular processes,including the transition from vegetative growth to flower development in plants.However,their role in regulating the fruit chlorophyll content is poorly understood.In this study,SlCOL1,the tomato(Solanum lycopersicum)ortholog of Arabidopsis CONSTANS,was shown to play key roles in controlling fruit chlorophyll.The suppression of SlCOL1 expression led to a reduction in the chlorophyll content of immature green fruit,while the overexpression of SlCOL1 increased it.An analysis of protein-protein interactions indicated that SlCOL1 forms a complex with GOLDEN2-LIKE(GLK2),which promotes the stability of its protein.The overexpression of SlCOL1in the glk2 null mutation background of tomato failed to promote chlorophyll accumulation in the immature green fruit,which suggests that GLK2 is required for the function of SlCOL1 in regulating chlorophyll content.These results shed new light on the mechanisms used by COL1 and GLK2 to regulate fruit development and chlorophyll accumulation in tomato.
基金supported by the National Natural Sciences Foundation of China(32302623 and 32172639)。
文摘The plant growth process is accompanied by dynamic changes in the microtubules,and the rearrangement of microtubules is regulated by diverse microtubule-associated proteins(MAPs).Plant MAP65s have been exhaustively characterized in some species,but the information about MAP65 family members in tomato(Solanum lycopersicum)is limited.In this study,nine SlMAP65 family genes were identified in the tomato genome.Then a systematic analysis that considered the physio-chemical properties,evolution,conserved motifs,domains,gene structure,and cis-regulatory elements of SlMAP65 family members was conducted.The family member Sl MAP65-1,which had the highest expression,was knocked out by CRISPR/Cas9.The tomato fruit of slmap65-1 loss of function lines showed an elongated morphology,and the data indicated that SlMAP65-1 is involved in fruit morphogenesis at the early fruit development stage.These results provide new insights for fruit morphogenesis-related research and future functional studies of the SlMAP65 family members in tomato.
基金support from the Study on Vegetable Science of Farmland System in Qinghai-Tibet Plateau(Grant No.2019QZKK0303)funded by the Sichuan International Science and Technology Innovation Cooperation/Hong Kong Macao Taiwan Science and Technology Innovation Cooperation Project(Grant No.2022YFH0071)。
文摘Secondary salinization is a major environmental factor that causes a stress response and growth inhibition in plants in protected agriculture.The positive effect of a low red to far-red light ratio(R:FR)in salt tolerance through antioxidant defense has been reported,while the underlying model remains obscure.In this study,we used physiological and genetic approaches to investigate the relationship between H_(2)O_(2) signaling and low R:FR-induced salt tolerance and antioxidant capacity in tomato seedlings.This study found that low R:FR treatment with calcium nitrate stress(SL treatment)enhanced the growth of plants and increased the net photosynthetic rate 5 days after stress compared with a higher R:FR ratio and calcium nitrate stress(S treatment).With transcriptomic analysis of tomato leaves at 5 d,compared with CK,most of glutaredoxin genes and antioxidant enzymes were upregulated by S treatment,which were upregulated further by SL treatment.Compared to the S treatment,within 5 days,the H_(2)O_(2) level was increased faster before 24 h and it was slowed down after 24 h by SL treatment,with less H_(2)O_(2) accumulation at 5 d than that of S treatment.The enhancement of gene expression of RBOH genes were also shown at 24 h under SL.It was found that stomatal conductance followed the dynamic change of H_(2)O_(2),with a rapid closure of stomata of a decrease at 3 h and an increase after 9 h in SL treatment compared to S treatment,respectively.There was same trend of stomata opening degrees of tomato leaves observed by optical microscope.However,the inhibitor of H_(2)O_(2) production(DPI pretreatment)weakened the positive effect of low R:FR on the regulation of stomatal movement.In addition,SL treatment increased the antioxidant enzyme activities and proline content and decreased the MDA content as compared to the S treatment,while the enhancement of ROS homeostasis was reduced by the DPI pretreatment.In conclusion,low R:FR improved redox homeostasis and stomatal status under calcium nitrate stress through H_(2)O_(2)signaling,improving the adaptation of tomato seedlings to soil salinization stress.
基金supported by the European Union's Horizon 2020 Research and Innovation Programme under Grant No.774244(Breeding for resilient,efficient and sustainable organic vegetable productionBRESOV)by‘RGV-FAO'project funded by the Italian Ministry of Agriculture,Food Sovereignty and Forests。
文摘The increasing conversion of agricultural land to organic farming requires the development of specifically adapted cultivars.So far,in tomato there is lack of research for selection of germplasm suitable for sustainable agroecosystems.In this study,we investigated the genotypic and environmental factors affecting the variation of plant,fruits,and root traits in 39 tomato genotypes grown under organic farming conditions.Four independent experiments were conducted in Italy and Spain across two consecutive seasons in 2019 and 2020.For all traits,the factorial linear regression model to estimate the main effects of genotype(G),location(L),year of cultivation(Y)and their interactions,revealed highly significant(P<0.001)variations,with the G factor being largely predominant for most traits.The implementation of the“which-won-where”,“mean performance versus stability”and“discriminative vs representativeness”patterns in the GGE(Genotype plus Genotype by Environment interaction)analysis,allowed the identification of superior cultivars with high stability across the testing environments.Genomic characterization with 30890 high quality SNPs from dd RADseq genotyping analysis,revealed that a specific cluster of cherry tomato accessions were low performing in terms of yield and fruit weight,on the contrary,showed a high content of soluble solids,which in agreement with GGE analysis.Results of this study provide a framework for the potential use of this locally adapted tomato germplasm to address the needs of more sustainable agriculture.
基金Weifang Vocational College Research Project and the National Key Research and Development Program of China(2023YFE0104700).
文摘This study investigated the effects of chlorine-based fertilizers under varying nitrogen solution concentrations in a soilless culture system. The experiment included four nitrogen solution concentration levels, with nitrogen concentrations of 6 mmol/L (C1), 12 mmol/L (C2), 18 mmol/L (C3), and 24 mmol/L (C4). Each nutrient concentration level was further divided into four chloride ion treatments (R1, R2, R3, and R4), where 100%, 60%, 33%, and 0% of the NH4+ and K+ ions were derived from NH4Cl and KCl, respectively. The length, surface area and volume of root were significantly higher by 25.3%~136.9%, 40.1%~173.1%, 27.9%~178.0%, respectively, in the R4 treatment than in the R1 and R2 treatments at flowering stage. The aboveground biomass and yield in the R4 treatment were significantly higher, by approximately 15.6%~43.5% and 16.6%~28.6%, respectively, than in the R1, R2, and R3 treatments at the picking stage. The C3 and C4 treatments significantly decreased biomass and yield by 31.9%~50.2% and 20.7%~50.5%, respectively, compared to the C1 and C2 treatments at the picking stage. Besides, the higher nutrient solution increased the incidence of blossom-end rot. In conclusion, high concentrations of chloride ions in nutrient solutions, especially when the Cl− concentration exceeded 10 mmol/L, have been shown to inhibit tomato growth in soilless culture systems. Therefore, replacing sulfur-based fertilizers by chlorine-based fertilizers is not recommended for tomato production under the studied conditions.
基金financially supported by the National Natural Science Foundation of China(Grant Nos.32202518 and 32070601)Shandong University of Technology PhD Start-up Fund(418097)。
文摘Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modification on RNA is involved in a diverse range of stress response processes.There is a significant knowledge gap regarding the precise roles of m^(6)A modification in tomato,particularly for cold stress response.Here,we assessed the m^(6)A modification landscape of S.lycopersicum'Micro-Tom'leaves in response to low-temperature stress.Furthermore,we investigated the potential relationship among m^(6)A modification,transcriptional regulation,alternative polyadenylation events,and protein translation via MeRIP-seq,RNA-seq,and protein mass spectrometry.After omic date analysis,11378 and 10735 significant m^(6)A peak associated genes were identified in the control and cold treatment tomato leaves,respectively.Additionally,we observed a UGUACAK(K=G/U)motif under both conditions.Differential m^(6)A site associated genes most likely play roles in protein translation regulatory pathway.Besides directly altering gene expression levels,m^(6)A also leads to differential poly(A)site usage under low-temperature.Finally,24 important candidate genes associated with cold stress were identified by system-level multi-omic analysis.Among them,m^(6)A modification levels were increased in SBPase(Sedoheptulose-1,7-bisphosphatase,Solyc05g052600.4)mRNA,causing distal poly(A)site usage,downregulation of mRNA expression level,and increased protein abundance.Through these,tomato leaves try to maintain normal photo synthetic carbon assimilation and nitro gen metabolism under low-temperature condition.The comprehensive investigation of the m^(6)A modification landscape and multi-omics analysis provide valuable insights into the epigenetic regulatory mechanisms in tomato cold stress response.
基金supported by the National Natural Science Foundation of China(Grant Nos.32072651,31772356)China Agriculture Research System of MOF and MARA(Grant No.CARS23)+1 种基金Joint Fund for Innovation Enhancement of Liaoning Province(Grant No.2021-NLTS-11-01)Support Program for Young and middle-aged Scientific and technological Innovation Talents(Grant No.RC210293)。
文摘The essential photoprotective role of proton gradient regulation 5(PGR5)-dependent cyclic electron flow(CEF)has been reported in Arabidopsis,rice,and algae.However,its functional assessment has not been performed in tomato yet.In this study,we focused on elucidate the function of SlPGR5 and SlPGR5-like photosynthetic phenotype 1(PGRL1)in tomato.We performed RNA interference and found that SlPGR5/SlPGRL1-suppressed transformants exhibited extremely low CO_(2)assimilation capacity,their photosystem I(PSI)and PSII were severely photoinhibited and chloroplasts were obviously damaged.The SlPGR5/SlPGRL1-suppressed plants almost completely inhibited CEF and Y(ND),and PSII photoinhibition may be directly related to the inability to produce sufficient proton motive force to induce NPQ.The transgenic plants overexpressing SlPGR5 and SlPGRL1 driven by 35S promoter capable alleviate photoinhibition of plants under low night temperature.The transcriptomic and proteomic analyses suggested that the nuclear gene transcription and turnover of chloroplast proteins,including the plastoglobule-related proteins,were closely related to SlPGR5/SlPGRL1 pathway dependent CEF.The bridge relationship between CEF and chloroplast quality maintenance was a novel report to our knowledge.In conclusion,these results revealed the regulatory mechanism of the SlPGR5/SlPGRL1 pathway in photoprotection and maintenance of chloroplast function in tomato,which is crucial for reduce yield loss,especially under adverse environmental conditions.
基金supported by the National Natural Science Foundation of China (41671295)the Agricultural Scientific and Technological Project in Shaanxi Province,China (2014K01-14-03)
文摘Potassium(K) and magnesium(Mg) levels and their balances are two factors affecting the growth of plant. However, the responses of different crop cultivars to K/Mg ratios are less clear. This study was aimed at assessing the different responses of tomato(Solanum Lycopersicum L.) cultivars to the different K/Mg supply ratios. Three tomato cultivars(Zhongza 9(ZZ), Gailiangmaofen(MF), and Jinpengchaoguan(JP)) were grown in pots with three different K+/Mg2+ratios(4:0, 4:1 and 8:1, represented by K/Mg4:0, K/Mg4:1, and K/Mg8:1, respectively). Compared with K/Mg4:1treatment, the leaf chlorophyll content, net photosynthetic rate, and total biomass of tomato seedlings under K/Mg4:0treatments were decreased by 69.7, 89.1, and 53.1%, respectively. The Mg deficiency symptoms were observed when the Mg content in shoot became lower than 4 mg g–1DW. Compared with K/Mg4:1treatment, total biomass of tomato seedlings of K/Mg8:1treatment was decreased by 21.6%; the shoot and root Mg contents were decreased by 10.4 and 21.8%, respectively; and Mg uptake of tomato was reduced by 34.1%. There were significant differences in biomass and Mg uptake for the three cultivars between the different K+/Mg2+treatments. The Mg uptake of the three different cultivars ranked as ZZ>JP>MF under Mg deficiency and high K condition. In conclusion, the growth and Mg uptake and allocation of tomato were influenced significantly by imbalance K and Mg supply. JP and ZZ were the cultivars with the highest efficiency in Mg uptake.
文摘A study was conducted to determine the genetic diversity of 39 determinate and indeterminate tomato inbred lines collected from China, Japan, S. Korea, and USA. Using 35 SSR polymorphic markers, a total of 150 alleles were found with moderate levels of diversity, and a high number of unique alleles existing in these tomato lines. The mean number of alleles per locus was 4.3 and the average polymorphism information content （PIC） was 0.31. Unweighted Pair Group Method with Arithmetic Mean （UPGMA） clustering at genetic similarity value of 0.85 grouped the inbred lines into four groups, where one USA cultivar formed a separate and more distant cluster. The most similar inbred lines are from USA, both with determinate type, whereas the most different lines are from USA （Us-16） and Japan （Ja-2） with determinate and indeterminate growth habit, respectively. Clustering was consistent with the known information regarding geographical location and growth habit. The genetic distance information reported in this study might be used by breeders when planning future crosses among these inbred lines.
