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Dietary supplementation with citrus peel extract in transition period improves rumen microbial composition and ameliorates energy metabolism and lactation performance of dairy cows
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作者 Lingxue Ju Qi Shao +8 位作者 zhiyuan fang Erminio Trevisi Meng Chen Yuxiang Song Wenwen Gao Lin Lei Xinwei Li Guowen Liu Xiliang Du 《Journal of Animal Science and Biotechnology》 2025年第1期441-454,共14页
Background During the transition period,excessive negative energy balance(NEB)lead to metabolic disorders and reduced milk yield.Rumen microbes are responsible for resolving plant material and producing volatile fatty... Background During the transition period,excessive negative energy balance(NEB)lead to metabolic disorders and reduced milk yield.Rumen microbes are responsible for resolving plant material and producing volatile fatty acids(VFA),which are the primary energy source for cows.In this study,we aimed to investigate the effect of citrus peel extract(CPE)supplementation on rumen microbiota composition,energy metabolism and milk performance of peri-partum dairy cows.Methods Dairy cows were fed either a basal diet(CON group)or the same basal diet supplemented with CPE via intragastric administration(4 g/d,CPE group)for 6 weeks(3 weeks before and 3 weeks after calving;n=15 per group).Samples of serum,milk,rumen fluid,adipose tissue,and liver were collected to assess the effects of CPE on rumen microbiota composition,rumen fermentation parameters,milk performance,and energy metabolic status of dairy cows.Results CPE supplementation led to an increase in milk yield,milk protein and lactose contents,and serum glucose levels,while reduced serum concentrations of non-esterified fatty acid,β-hydroxybutyric acid,insulin,aspartate aminotransferase,alanine aminotransferase,and haptoglobin during the first month of lactation.CPE supplemen-tation also increased the content of ruminal VFA.Compared to the CON group,the abundance of Prevotellaceae,Methanobacteriaceae,Bacteroidales_RF16_group,and Selenomonadaceae was found increased,while the abun-dance of Oscillospiraceae,F082,Ruminococcaceae,Christensenellaceae,Muribaculaceae UCG-011,Saccharimona-daceae,Hungateiclostridiaceae,and Spirochaetaceae in the CPE group was found decreased.In adipose tissue,CPE supplementation decreased lipolysis,and inflammatory response,while increased insulin sensitivity.In the liver,CPE supplementation decreased lipid accumulation,increased insulin sensitivity,and upregulated expression of genes involved in gluconeogenesis.Conclusions Our findings suggest that CPE supplementation during the peripartum period altered rumen micro-biota composition and increased ruminal VFA contents,which further improved NEB and lactation performance,alleviated lipolysis and inflammatory response in adipose tissue,reduced lipid accumulation and promoted gluconeo-genesis in liver.Thus,CPE might contribute to improve energy metabolism and consequently lactation performance of dairy cows during the transition period. 展开更多
关键词 Adipose tissue Citrus peel extract Energy metabolism LIVER Rumen microbiota
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Utilization of Ogura CMS germplasm with the clubroot resistance gene by fertility restoration and cytoplasm replacement in Brassica oleracea L 被引量:12
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作者 Wenjing Ren zhiyuan Li +10 位作者 Fengqing Han Bin Zhang Xing Li zhiyuan fang Limei Yang Mu Zhuang Honghao Lv Yumei Liu Yong Wang Hailong Yu Yangyong Zhang 《Horticulture Research》 SCIE 2020年第1期1971-1980,共10页
Clubroot disease,a major plant root disease caused by Plasmodiophora brassicae,has become one of the most destructive diseases among cultivated cruciferous vegetables.However,clubroot-resistant Brassica oleracea mater... Clubroot disease,a major plant root disease caused by Plasmodiophora brassicae,has become one of the most destructive diseases among cultivated cruciferous vegetables.However,clubroot-resistant Brassica oleracea materials are rare.A few clubroot-resistant cabbage varieties are available on the market,but all are Ogura cytoplasmic male sterile(CMS)types.Therefore,in this study,to reutilize the clubroot-resistant Ogura CMS germplasm of cabbage,a new fertility-restored Ogura CMS material,16Q2-11,was used as a bridge to transfer the clubroot resistance(CR)gene from the Ogura CMS cytoplasm to the normal cytoplasm by a two-step method(a fertility restoration and cytoplasm replacement method).In the first cross for fertility restoration of Ogura CMS clubroot-resistant cabbage(FRCRC),16Q2-11 was used as a restorer to cross with Ogura CMS materials containing the CR gene CRb2.Eleven Rfo-positive progenies were generated,of which four contained CRb2:F8-514,F8-620,F8-732 and F8-839.After inoculation with race 4 of P.brassicae,these four CRb2-positive individuals showed resistance.Furthermore,F8-514 and F8-839 were then used as male parents in the second cross of FRCRC to cross with cabbage inbred lines,resulting in the successful introgression of the CRb2 gene into the inbred lines.All offspring produced from this step of cross,which had a normal cytoplasm,showed a high resistance to race 4 of P.brassicae and could be utilized for the breeding of clubrootresistant cabbage varieties in the future.This is the first time that the Ogura CMS restorer has been used to restore the fertility of Ogura CMS clubroot-resistant cabbages,which could improve germplasm diversity in cabbage and provide a reference method for using CMS germplasm in Brassica crops. 展开更多
关键词 FERTILITY GERMPLASM BREEDING
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Genetic diversity and population structure analysis of 161 broccoli cultivars based on SNP markers 被引量:4
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作者 Jingjing Huang Yumei Liu +8 位作者 Fengqing Han zhiyuan fang Limei Yang Mu Zhuang Yangyong Zhang Honghao Lv Yong Wang Jialei Ji Zhansheng Li 《Horticultural Plant Journal》 SCIE CSCD 2021年第5期423-433,共11页
To better understand the genetic diversity and population structure of broccoli cultivars planted in China,a total of 161 representative broccoli cultivars in the past 25 years were collected and analysed based on sin... To better understand the genetic diversity and population structure of broccoli cultivars planted in China,a total of 161 representative broccoli cultivars in the past 25 years were collected and analysed based on single nucleotide polymorphism(SNP)markers.Ten pairs of primers with good polymorphism and high resolution were screened from 315 pairs of SNP primers by 3 broccoli accessions(inbred lines)with different phenotypes and maturity.The 10 pairs of SNP primers were selected,producing 78 alleles.The diversity analysis indicated that the polymorphism information content(PIC)of SNP primer ranged from 0.64 to 0.90.The observed number of alleles(Na)was 2.00,the effective number of alleles(Ne)was 1.11–2.00,the Nei’s gene diversity(H)was 0.10–0.50,and Shannon information index(I)was 0.20–0.70 using PopGene32 software.The clustering results showed that the 161 broccoli cultivars could be divided into 4 major subgroups(A,B,C and D),foreign cultivars were all assigned to subgroup A,and domestic cultivars were assigned to 3 subgroups of B,C,and D.This study indicated that some domestic cultivars and foreign cultivars were similar in genetic background,but most domestic cultivars were still different from the Japanese cultivars.When K=2,the population structure result presented that 161 broccoli cultivars could be divided into 1 simple group(2 groups)and 1 mixed group.When Q≥0.6,143(88.82%)broccoli cultivars belonged to the simple groups.In simple groups 68(42.24%)broccoli cultivars of group 1 were derived from Japan,the United States,Switzerland,the Netherlands,China-Taiwan,and China-Mainland;75(46.58%)broccoli cultivars belonged to group 2;when Q<0.6,18(11.18%)broccoli cultivars belonged to the mixed groups.This study is helpful to understand the diversity and resolution of broccoli cultivars from worldwide,which is beneficial to plant breeding and materials innovation.And meanwhile,this result is also used for construction of broccoli fingerprint serving for cultivar identification. 展开更多
关键词 BROCCOLI Genetic diversity Population structure analysis FINGERPRINT SNP
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An update on the arsenal:mining resistance genes for disease management of Brassica crops in the genomic era 被引量:5
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作者 Honghao Lv zhiyuan fang +2 位作者 Limei Yang Yangyong Zhang Yong Wang 《Horticulture Research》 SCIE 2020年第1期2357-2374,共18页
Brassica species include many economically important crops that provide nutrition and health-promoting substances to humans worldwide.However,as with all crops,their production is constantly threatened by emerging vir... Brassica species include many economically important crops that provide nutrition and health-promoting substances to humans worldwide.However,as with all crops,their production is constantly threatened by emerging viral,bacterial,and fungal diseases,whose incidence has increased in recent years.Traditional methods of control are often costly,present limited effectiveness,and cause environmental damage;instead,the ideal approach is to mine and utilize the resistance genes of the Brassica crop hosts themselves.Fortunately,the development of genomics,molecular genetics,and biological techniques enables us to rapidly discover and apply resistance(R)genes.Herein,the R genes identified in Brassica crops are summarized,including their mapping and cloning,possible molecular mechanisms,and application in resistance breeding.Future perspectives concerning how to accurately discover additional R gene resources and efficiently utilize these genes in the genomic era are also discussed. 展开更多
关键词 CROPS RESISTANCE utilize
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Genome-wide identification and analysis of cytokinin dehydrogenase/oxidase(CKX) family genes in Brassica oleracea L.reveals their involvement in response to Plasmodiophora brassicae infections 被引量:3
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作者 Mingzhao Zhu Yong Wang +6 位作者 Shujin Lu Limei Yang Mu Zhuang Yangyong Zhang Honghao Lv zhiyuan fang Xilin Hou 《Horticultural Plant Journal》 SCIE CSCD 2022年第1期68-80,共13页
Cytokinins are a class of phytohormones that promote cell division and differentiation and are thought to affect plant immunity to multiple pathogens.However,a comprehensive analysis of cytokinin dehydrogenase/oxidase... Cytokinins are a class of phytohormones that promote cell division and differentiation and are thought to affect plant immunity to multiple pathogens.However,a comprehensive analysis of cytokinin dehydrogenase/oxidase(CKX)family genes in cabbage has not been reported.In this study,a total of 36 CKX genes were identified using a genome-wide search method.Phylogenetic analysis classified these genes into three groups.They were distributed unevenly across nine chromosomes in B.oleracea,and 15 of them did not contain any introns.The results of colinearity analysis showed that 36 CKX gene in Arabidopsis was present in several copies in the Brassica oleracea genome.An analysis of cisacting elements indicated that all genes possessed at least one stress or hormone responsive cis-acting element.A heatmap of CKX gene expression showed the patterns of expression of these genes in various tissues and organs.Three genes(Bol028363,Bol031036 and Bol018140)were relatively highly expressed in all of the investigated tissues under normal conditions,showing the expression profile of housekeeping genes.Generally,the expression patterns of CKX genes in Jingfeng 1 and Xiangan 336 were quite different under the same treatment.Notably,three genes(Bol020547,Bol028392 and Bol045724)were significantly down-regulated and up-regulated in the susceptible and resistant material,respectively,after inoculation,which may indicate their crucial roles in resistance to clubroot disease.The results provide insights for better understanding the roles of CKX genes in the B.oleracea–P.brassicae interaction. 展开更多
关键词 Brassica oleracea GENOME-WIDE Cytokinin dehydrogenase/oxidase(CKX)genes CLUBROOT
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Dissection of two QTL clusters underlying yield-related heterosis in the cabbage founder parent 01–20 被引量:2
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作者 Xing Li Honghao Lv +7 位作者 Bin Zhang zhiyuan fang Limei Yang Mu Zhuang Yumei Liu Zhansheng Li Yong Wang Yangyong Zhang 《Horticultural Plant Journal》 SCIE CAS CSCD 2023年第1期77-88,共12页
Cabbage has significant heterosis and most commercial cultivars are hybrids.To explore genetic basis of cabbage heterosis and promote cabbage heterosis utilization,we constructed two populations by crossing 100 DH lin... Cabbage has significant heterosis and most commercial cultivars are hybrids.To explore genetic basis of cabbage heterosis and promote cabbage heterosis utilization,we constructed two populations by crossing 100 DH lines derived from a cabbage hybrid 01–20×96–100 with two female parents.Hybrids exhibited different extents of heterosis,the mean value of economic yield was 2.6 times bigger than parents.We identified 66 and 73 QTLs associated with mid-parent heterosis and transgressive heterosis of twelve yield-related traits,respectively.Some QTLs could be detected under the two-year experiment existed in two populations with different testers,showing relatively high phenotypic contribution rate(15.8%–20.0%).Heterosis QTLs exhibited clustered distribution in several cabbage chromosome regions.Two dominant genetic regions,mk300–316 and mk258–268,originated from the elite parent 01–20,exhibited significant genetic effects for yield-related heterosis,which were first identified.Three elite DH lines(D22,D46,D83)harboring these two dominant regions were selected as having strong heterosis in cabbage production.Candidate gene analysis revealed that some genes participating in biosynthetic processes of carbohydrates and some responses to auxin might affect cabbage yield heterosis.QTL identification and genetic dissection of yield-related traits provide new insights into the genetic effects of cabbage heterosis. 展开更多
关键词 CABBAGE Yield-related traits HETEROSIS QTL Genetic analysis New inbred line breeding
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Map-based cloning and CRISPR/Cas9-based editing uncover BoNA1 as the causal gene for the no-anthocyanin-accumulation phenotype in curly kale (Brassica oleracea var. sabellica)
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作者 Kaiwen Yuan Xinyu Zhao +7 位作者 Wenru Sun Limei Yang Yangyong Zhang Yong Wang Jialei Ji Fengqing Han zhiyuan fang Honghao Lv 《Horticulture Research》 SCIE CSCD 2023年第8期194-202,共9页
Brassica oleracea comprises several important vegetable and ornamental crops,including curly kale,ornamental kale,cabbage,broccoli,and others.The accumulation of anthocyanins,important secondary metabolites valuable t... Brassica oleracea comprises several important vegetable and ornamental crops,including curly kale,ornamental kale,cabbage,broccoli,and others.The accumulation of anthocyanins,important secondary metabolites valuable to human health,in these plants varies widely and is responsible for their pink to dark purple colors.Some curly kale varieties lack anthocyanins,making these plants completely green.The genetic basis of this trait is still unknown.We crossed the curly kale inbred line BK2019(without anthocyanins)with the cabbage inbred line YL1(with anthocyanins)and the Chinese kale inbred line TO1000(with anthocyanins)to generate segregating populations.The no-anthocyanin trait was genetically controlled by a recessive gene,bona1.We generated a linkage map and mapped bona1 to a 256-kb interval on C09.We identified one candidate gene,Bo9g058630,in the target genomic region;this gene is homologous to AT5G42800,which encodes a dihydroflavonol-4-reductase-like(DFR-like)protein in Arabidopsis.In BK2019,a 1-bp insertion was observed in the second exon of Bo9g058630 and directly produced a stop codon.To verify the candidate gene function,CRISPR/Cas9 gene editing technology was applied to knock out Bo9g058630.We generated three bona1 mutants,two of which were completely green with no anthocyanins,confirming that Bo9g058630 corresponds to BoNA1.Different insertion/deletion mutations in BoNA1 exons were found in all six of the other no-anthocyanin kale varieties examined,supporting that independent disruption of BoNA1 resulted in no-anthocyanin varieties of B.oleracea.This study improves the understanding of the regulation mechanism of anthocyanin accumulation in B.oleracea subspecies. 展开更多
关键词 crops fir insertion
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Nuciferine protects against high-fat diet-induced hepatic steatosis and insulin resistance via activating TFEB-mediated autophagy——lysosomal pathway 被引量:10
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作者 Xiliang Du Chiara Di Malta +13 位作者 zhiyuan fang Taiyu Shen Xiaodi Niu Meng Chen Bo Jin Hao Yu Lin Lei Wenwen Gao Yuxiang Song Zhe Wang Chuang Xu Zhijun Cao Guowen Liu Xinwei Li 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2022年第6期2869-2886,共18页
Nonalcoholic fatty liver disease(NAFLD) is characterized by hepatic steatosis and insulin resistance and there are currently no approved drugs for its treatment.Hyperactivation of mTOR complex1(mTORCl) and subsequent ... Nonalcoholic fatty liver disease(NAFLD) is characterized by hepatic steatosis and insulin resistance and there are currently no approved drugs for its treatment.Hyperactivation of mTOR complex1(mTORCl) and subsequent impairment of the transcription factor EB(TFEB)-mediated autophagy-lysosomal pathway(ALP) are implicated in the development of NAFLD.Accordingly,agents that augment hepatic TFEB transcriptional activity may have therapeutic potential against NAFLD.The objective of this study was to investigate the effects of nuciferine,a major active component from lotus leaf,on NAFLD and its underlying mechanism of action.Here we show that nuciferine activated ALP and alleviated steatosis,insulin resistance in the livers of NAFLD mice and palmitic acid-challenged hepatocytes in a TFEB-dependent manner.Mechanistic investigation revealed that nuciferine interacts with the Ragulator subunit hepatitis B X-interacting protein and impairs the interaction of the Ragulator complex with Rag GTPases,thereby suppressing lysosomal localization and activity of mTORC1,which activates TFEB-mediated ALP and further ameliorates hepatic steatosis and insulin resistance.Our present results indicate that nuciferine may be a potential agent for treating NAFLD and that regulation of the mTORCl-TFEB-ALP axis could represent a novel pharmacological strategy to combat NAFLD. 展开更多
关键词 AUTOPHAGY Fatty liver Lotus leaf LYSOSOME MiT/TFE mTORC1 Ragulator TFEB
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Online power management strategy for plug-in hybrid electric vehicles based on deep reinforcement learning and driving cycle reconstruction 被引量:2
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作者 zhiyuan fang Zeyu Chen +2 位作者 Quanqing Yu Bo Zhang Ruixin Yang 《Green Energy and Intelligent Transportation》 2022年第2期62-74,共13页
This paper proposes a novel power management strategy for plug-in hybrid electric vehicles based on deep reinforcement learning algorithm.Three parallel soft actor-critic(SAC)networks are trained for high speed,medium... This paper proposes a novel power management strategy for plug-in hybrid electric vehicles based on deep reinforcement learning algorithm.Three parallel soft actor-critic(SAC)networks are trained for high speed,medium speed,and low-speed conditions respectively;the reward function is designed as minimizing the cost of energy cost and battery aging.During operation,the driving condition is recognized at each moment for the algorithm invoking based on the learning vector quantization(LVQ)neural network.On top of that,a driving cycle reconstruction algorithm is proposed.The historical speed segments that were recorded during the operation are reconstructed into the three categories of high speed,medium speed,and low speed,based on which the algorithms are online updated.The SAC-based control strategy is evaluated based on the standard driving cycles and Shenyang practical data.The results indicate the presented method can obtain the effect close to dynamic programming and can be further improved by up to 6.38%after the online update for uncertain driving conditions. 展开更多
关键词 Electric vehicle Deep reinforcement learning Power management strategy Driving cycle reconstruction Optimal control strategy
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Tumor-immune Co-evolution in hepatocellular carcinoma and itsimplication for immunotherapy resistance
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作者 zhiyuan fang Huayu Yang Yilei Mao 《iLIVER》 2022年第1期78-80,共3页
1.Introduction In recent years,investigators have witnessed great progress in understanding the tumor microenvironment(TME)and evolution,which has been accompanied by a substantial number of newly developed targeted t... 1.Introduction In recent years,investigators have witnessed great progress in understanding the tumor microenvironment(TME)and evolution,which has been accompanied by a substantial number of newly developed targeted therapies and immunotherapies.Tumors are capable of escaping immune surveillance in the context of both spontaneous immune response and immunotherapies,and these two immune evasion processes share many overlapping mechanisms,such as human leukocyte antigen loss of heterozygosity(HLA-LOH)and immunoediting[1].For hepatocellular carcinoma(HCC),numerous treatment strategies targeting the TME have been proposed in recent years[2,3].Among these strategies,immune-checkpoint inhibitors(ICIs)have been found to be a promising therapeutic choice[4–6].The combination of atezolizumab(anti--programmed death-ligand 1,PD-L1)and bevacizumab(anti-vascular endothelial growth factor,VEGF)antibodies demonstrated significantly better overall and progression-free survival than the kinase inhibitor sorafenib in patients with unresectable HCC in a phase III trial[4],and this combination was established as a first-line treatment for advanced HCC.However,the response rate for ICIs was limited[4–6],and it was reported that nonalcoholic steatohepatitis-related HCC was less responsive to ICIs than other HCCs[7].Given the clinical importance of tolerance to immunotherapy in HCC,tumor-immune co-evolution deserves more attention and may provide novel ideas for developing new combination therapies that target multiple mechanisms of immunotherapy resistance. 展开更多
关键词 IMMUNOTHERAPY HEPATOCELLULAR evolution
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