Four ULF (0.01 Hz - 20 Hz) electromagnetic stations had been gradually established and put into service from 2010 to 2011 in Zhaotong area, Yunnan province. Two stations of Qiaojia and Yongshan have been running with ...Four ULF (0.01 Hz - 20 Hz) electromagnetic stations had been gradually established and put into service from 2010 to 2011 in Zhaotong area, Yunnan province. Two stations of Qiaojia and Yongshan have been running with continuous and high quality recordings and free of influence of solar activities, like magnetic storms. In this investigation, daily recordings from 1 January 2020 to 22 May 2021 have been examined of these both stations. The results show that weak anomalous signals appeared at the beginning of March 2021 with relative low magnitudes of 0.6 nT at Qiaojia station and 0.3 nT at Yongshan station. At the end of this month, the emissions gained an abrupt increase and the amplitudes reached up to 3.8 nT at Qiaojia station and 1.2 nT at Yongsha station. Then, the amplitude decreased to be 0.5 - 1.5 nT and 0.6 - 1.3 nT respectively at both stations but with a high variation frequency in all components. This situation lasted till the Yangbi </span><i><span style="font-family:Verdana;">M</span></i><sub><span style="font-family:Verdana;">S</span></sub><span style="font-family:Verdana;"> 6.4 earthquake happened on May 21, 2021, more than 300 km away from these two ULF observing stations. Totally, the ULF magnetic emissions had been characterized by a synchronous variation in all components at two observing stations.展开更多
Suspended and waterborne polyurethane immobilized nitrifying bacteria have been adopted for evaluating the effects of environmental changes, such as temperature, dissolved oxygen （DO） concentration and pH, on nitrif...Suspended and waterborne polyurethane immobilized nitrifying bacteria have been adopted for evaluating the effects of environmental changes, such as temperature, dissolved oxygen （DO） concentration and pH, on nitrification characteristics under conditions of low ammonia concentrations. The results showed that nitrification was prone to complete with increasing pH, DO and temperature. Sensitivity analysis demonstrated the effects of temperature and pH on nitrification feature of suspended bacteria were slightly greater than those of immobilized nitrifying bacteria. Immobilized cells could achieve complete nitrification at low ammonia concentrations when DO was sufficient. Continuous experiments were carried out to discuss the removal of ammonia nitrogen from synthetic micropollute source water with the ammonia concentration of about 1mg/L using immobilized nitrifying bacteria pellets in an up-flow inner circulation reactor under different hydraulic retention times （HRT）. The continuous removal rate remains above 80% even under HRT 30 min. The results verified that the waterborne polyurethane immobilized nitrifying bacteria pellets had great potential applications for micro-pollution source water treatment.展开更多
The damage effect assessment of anti-ship missiles combines system science and weapon science,which can provide reference for the assessment of battlefield damage situation.In order to solve the difficulty of heteroge...The damage effect assessment of anti-ship missiles combines system science and weapon science,which can provide reference for the assessment of battlefield damage situation.In order to solve the difficulty of heterogeneous data aggregation and the difficulty in constructing the mapping between factors and damage effect,this paper analyzes the specific damage process of the anti-ship missile to the ship,and proposes a synthetic Evidential Reasoning(ER)–Adaptive Neural Fuzzy Inference System(ANFIS)to assess the damage effect.To solve the problem of fuzziness and uncertainty of criteria in the assessment process,the belief structure model is used to transform qualitative and quantitative information into a unified mathematical structure,and ER algorithm is used to fuse the information of lower-level criteria.In order to solve the problem of fuzziness and uncertainty of the information contained in the first-level variables,and the strong non-linear characteristics of the mapping between first-level variables and damage effect,the ANFIS with selfadaptation and self-learning is constructed.The map between the three first-level variables and damage effect is established,and the interaction process of the various factors in the damage effect assessment are clear.Sensitivity analysis shows that assessment model has good stability.The result analysis and comparative analysis show that the process proposed in this paper can effectively assess the damage effect of anti-ship missiles,and all criteria data are objective and comparable.展开更多
COVID-19 patients exhibit differential disease severity after SARS-CoV-2 infection.It is currently unknown as to the correlation between the magnitude of neutralizing antibody(NAb)responses and the disease severity in...COVID-19 patients exhibit differential disease severity after SARS-CoV-2 infection.It is currently unknown as to the correlation between the magnitude of neutralizing antibody(NAb)responses and the disease severity in COVID-19 patients.In a cohort of 59 recovered patients with disease severity including severe,moderate,mild,and asymptomatic,we observed the positive correlation between serum neutralizing capacity and disease severity,in particular,the highest NAb capacity in sera from the patients with severe disease,while a lack of ability of asymptomatic patients to mount competent NAbs.Furthermore,the compositions of NAb subtypes were also different between recovered patients with severe symptoms and with mild-tomoderate symptoms.These results reveal the tremendous heterogeneity of SARS-CoV-2-specific NAb responses and their correlations to disease severity,highlighting the needs of future vaccination in COVID-19 patients recovered from asymptomatic or mild illness.展开更多
Epigenetic modifications to histones dictate the differentiation of naïve CD4^(+) T cells into different subsets of effector T helper(TH)cells.The histone methyltransferase enhancer of zeste homolog 2(EZH2)has be...Epigenetic modifications to histones dictate the differentiation of naïve CD4^(+) T cells into different subsets of effector T helper(TH)cells.The histone methyltransferase enhancer of zeste homolog 2(EZH2)has been implicated in the mechanism regulating the differentiation of TH1,TH2 and regulatory T(Treg)cells.However,whether and how EZH2 regulates follicular helper T(TFH)cell differentiation remain unknown.Using a mouse model of acute lymphocytic choriomeningitis virus(LCMV)infection,we observed abundant EZH2 expression and associated H3K27me3 modifications preferentially in the early committed virus-specific TFH cells compared to those in TH1 cells.Ablation of EZH2 in LCMV-specific CD4^(+) T cells leads to a selective impairment of early TFH cell fate commitment,but not late TFH differentiation or memory TFH maintenance.Mechanistically,EZH2 specifically stabilizes the chromatin accessibility of a cluster of genes that are important for TFH fate commitment,particularly B cell lymphoma 6(Bcl6),and thus directs TFH cell commitment.Therefore,we identified the chromatin-modifying enzyme EZH2 as a novel regulator of early TFH differentiation during acute viral infection.展开更多
The efficient induction and long-term persistence of pathogen-specific memory CD8 T cells are pivotal to rapidly curb the reinfection.Recent studies indicated that long-noncoding RNAs expression is highly cell-and sta...The efficient induction and long-term persistence of pathogen-specific memory CD8 T cells are pivotal to rapidly curb the reinfection.Recent studies indicated that long-noncoding RNAs expression is highly cell-and stage-specific during T cell development and differentiation,suggesting their potential roles in T cell programs.However,the key lncRNAs playing crucial roles in memory CD8 T cell establishment remain to be clarified.Through CD8 T cell subsets profiling of lncRNAs,this study found a key lncRNA-Snhgl with the conserved naivehl-effectorlo-memoryh,expression pattern in CD8 T cells of both mice and human,that can promote memory formation while impeding effector CD8 in acute viral infection.Further,Snhgl was found interacting with the conserved vesicle trafficking protein Vps13D to promote IL-7Ra membrane location specifically.With the deep mechanism probing,the results show Snhgl-Vps13D regulated IL-7 signaling with its dual effects in memory CD8 generation,which not just because of the sustaining role of STAT5-BCL-2 axis for memory survival,but more through the STAT3-TCF1-Blimp1 axis for transcriptional launch program of memory differentiation.Moreover,we performed further study with finding a similar high-low-high expression pattern of human SNHG1A/PS13D/IL7R/TCF7 in CD8 T cell subsets from PBMC samples of the convalescent COVID-19 patients.The central role of Snhgl-Vps13D-IL-7R-TCF1 axis in memory CD8 establishment makes it a potential target for improving the vaccination effects to control the ongoing pandemic.展开更多
Acinetobacter baumannii(A.baumannii)poses a serious public health challenge due to its notorious antimicrobial resistance,particularly carbapenem-resistant A.baumannii(CRAB).In this study,we isolated a virulent phage,...Acinetobacter baumannii(A.baumannii)poses a serious public health challenge due to its notorious antimicrobial resistance,particularly carbapenem-resistant A.baumannii(CRAB).In this study,we isolated a virulent phage,named P1068,from medical wastewater capable of lysing CRAB,primarily targeting the K3 capsule type.Basic characterization showed that P1068 infected the A.baumannii ZWAb014 with an optimal MOI of 1,experienced a latent period of 10 min and maintained stability over a temperature range of 4–37C and pH range of 3–10.Phylogenetic and average nucleotide identity analyses indicate that P1068 can be classified as a novel species within the genus Obolenskvirus of the Caudoviricetes class as per the most recent virus classification released by the International Committee on Taxonomy of Viruses(ICTV).Additionally,according to classical morphological classification,P1068 is identified as a T4-like phage(Myoviridae).Interestingly,we found that the tail fiber protein(TFP)of P1068 shares 74%coverage and 88.99%identity with the TFP of a T7-like phage(Podoviridae),AbKT21phiIII(NC_048142.1).This finding suggests that the TFP gene of phages may undergo horizontal transfer across different genera and morphologies.In vitro antimicrobial assays showed that P1068 exhibited antimicrobial activity against A.baumannii in both biofilm and planktonic states.In mouse models of intraperitoneal infection,P1068 phage protected mice from A.baumannii infection and significantly reduced bacterial loads in various tissues such as the brain,blood,lung,spleen,and liver compared to controls.In conclusion,this study demonstrates that phage P1068 might be a potential candidate for the treatment of carbapenem-resistant and biofilmforming A.baumannii infections,and expands the understanding of horizontal transfer of phage TFP genes.展开更多
According to the World Health Organization(WHO)newly updated situation report on March 18th,2020,the coronavirus disease 2019(COVID-19)pandemic has confirmed 191,127 cases and claimed 7807 deaths worldwide.1 The etiol...According to the World Health Organization(WHO)newly updated situation report on March 18th,2020,the coronavirus disease 2019(COVID-19)pandemic has confirmed 191,127 cases and claimed 7807 deaths worldwide.1 The etiological agent of COVID-19 has been identified as a novel coronavirus,the severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),belonging to Sarbecovirus subgenus(genus Betacoronavirus,family Coronaviridae)and showing 79.6 and 96.2%sequence identity in nucleotide to SARS-CoV and a bat coronavirus(BatCoV RaTG13),respectively.2–4 Like SARS-CoV infection,a substantial fraction of COVID-19 patients exhibits severe respiratory symptoms and has to be hospitalized in intensive care unit.5–8 Although the mortality rate of COVID-19 is significantly lower than that of SARS-CoV infection,SARS-CoV-2 shows much higher human-to-human transmission rate,rapidly leading to a global pandemic declared by WHO on March 11th,2020.展开更多
Short-term water demand forecasting provides guidance on real-time water allocation in the water supply network, which help water utilities reduce energy cost and avoid potential accidents. Although a variety of metho...Short-term water demand forecasting provides guidance on real-time water allocation in the water supply network, which help water utilities reduce energy cost and avoid potential accidents. Although a variety of methods have been proposed to improve forecast accuracy, it is still difficult for statistical models to learn the periodic patterns due to the chaotic nature of the water demand data with high temporal resolution. To overcome this issue from the perspective of improving data predictability, we proposed a hybrid Wavelet-CNN-LSTM model, that combines time-frequency decomposition characteristics of Wavelet Multi-Resolution Analysis (MRA) and implement it into an advanced deep learning model, CNN-LSTM. Four models - ANN, Conv1D, LSTM, GRUN - are used to compare with Wavelet-CNN-LSTM, and the results show that Wavelet-CNN-LSTM outperforms the other models both in single-step and multi-steps prediction. Besides, further mechanistic analysis revealed that MRA produce significant effect on improving model accuracy.展开更多
Bacteria play an important role in the formation of primary Common Bile Duct(CBD)stones.However,the composition and function of the microbiota of bile duct in patients with primary CBD stones remained to be explored.W...Bacteria play an important role in the formation of primary Common Bile Duct(CBD)stones.However,the composition and function of the microbiota of bile duct in patients with primary CBD stones remained to be explored.We utilized the 16S rRNA gene high-throughput sequencing technology to analyze the microbial diversity and community composition of biliary and duodenal microbiota in 15 patients with primary CBD stones and 4 patients without biliary tract diseases.Alpha diversity analysis showed that the microbiota richness was similar in bile and intestinal fluid;Beta diversity analysis showed that there were differences in the composition between biliary microbiota and the duodenal microbiota,but the abundance of the main groups showed similarities.The composition of the biliary microbiota from gallstone patients was more complex,as was the duodenal microbiota.Proteobacteria and Firmicutes were the dominant bacteria at phylum level,accounting for at least 75%of the total reads in each subgroup.Pseudomonas and EscherichiaShigella were the major genus among subgroups,but Escherichia-Shigella had increased abundance in duodenal microbiota with primary choledocholithiasis,which may play an important role in stone formation.It is noteworthy that Clostridiumsensu_stricto,Lachnospiraceae_UCG-008,Butyrivibrio and Roseburia which could produce short chain fatty acids(SCFAs),were significantly decreased in biliary microbiota with primary CBD stones(p<0.05).Our study provided new insights into the compositional of normal biliary microbiota.The micro-ecology of biliary and duodenal in patients with stones is complex and closely related,and there is a potential for dysbacteriosis.The decrease in abundance of certain major acid-producing bacteria affects the health of the biliary tract and thus leads to the formation of stones.展开更多
The adaptive immunity that protects patients from coronavirus disease 2019(COVID-19),caused by severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),is not well characterized.In particular,the asymptomatic patie...The adaptive immunity that protects patients from coronavirus disease 2019(COVID-19),caused by severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),is not well characterized.In particular,the asymptomatic patients have been found to induce weak and transient SARS-CoV-2 antibody responses,but the underlying mechanisms remain unknown;meanwhile,the protective immunity that guide the recovery of these asymptomatic patients is elusive.Here,we characterized SARS-CoV-2-specific B-cell and T-cell responses in 10 asymptomatic patients and 64 patients with other disease severity(mild,n=10,moderate,n=32,severe,n=12)and found that asymptomatic or mild symptomatic patients failed to mount virus-specific germinal center(GC)B cell responses that result in robust and prolonged humoral immunity,assessed by GC response indicators including follicular helper T(TFH)cell and memory B cell responses as well as serum CXCL13 levels.Alternatively,these patients mounted potent virus-specific TH1 and CD8+T cell responses.In sharp contrast,patients of moderate or severe disease induced vigorous virus-specific GC B cell responses and associated TFH responses;however,the virus-specific TH1 and CD8+T cells were minimally induced in these patients.These results,therefore,uncovered the protective immunity in asymptomatic patients and also revealed the strikingly dichotomous and incomplete humoral and cellular immune responses in COVID-19 patients with different disease severity,providing important insights into rational design of effective COVID-19 vaccines.展开更多
Self-assembly of latex particles is of great importance for fabricating various functional colloidal crystals. In this paper, we review recent research on the self-assembly of latex particles for colloidal crystals, c...Self-assembly of latex particles is of great importance for fabricating various functional colloidal crystals. In this paper, we review recent research on the self-assembly of latex particles for colloidal crystals, covering the assembly forces and various assembly approaches of latex particles, including self-assembly by gravity sedimentation, vertical deposition, physical confinement, electric field, and magnetic field. Furthermore, some simple methods for assembling latex particles such as spin coating, spray coating, and printing are also summarized.展开更多
The functional exhaustion of CD8^(+)T cells represents a fundamental hallmark of chronic viral infection and cancer and,in both scenarios,is driven by prolonged exposure to persistent cognate antigens in the context o...The functional exhaustion of CD8^(+)T cells represents a fundamental hallmark of chronic viral infection and cancer and,in both scenarios,is driven by prolonged exposure to persistent cognate antigens in the context of an immunoinhibitory microenvironment.Exhausted CD8^(+)T cells upregulate the expression of a wide diversity of coinhibitory immunoreceptors(also referred to as immune checkpoint receptors),such as PD-1,Tim-3,LAG-3,and TIGIT.Concomitantly,exhausted CD8^(+)T cells lose their potential to differentiate into functional memory cells and are characterized by hierarchical loss of effector function,leading to compromised tumor control and viral eradication[1,2].展开更多
文摘Four ULF (0.01 Hz - 20 Hz) electromagnetic stations had been gradually established and put into service from 2010 to 2011 in Zhaotong area, Yunnan province. Two stations of Qiaojia and Yongshan have been running with continuous and high quality recordings and free of influence of solar activities, like magnetic storms. In this investigation, daily recordings from 1 January 2020 to 22 May 2021 have been examined of these both stations. The results show that weak anomalous signals appeared at the beginning of March 2021 with relative low magnitudes of 0.6 nT at Qiaojia station and 0.3 nT at Yongshan station. At the end of this month, the emissions gained an abrupt increase and the amplitudes reached up to 3.8 nT at Qiaojia station and 1.2 nT at Yongsha station. Then, the amplitude decreased to be 0.5 - 1.5 nT and 0.6 - 1.3 nT respectively at both stations but with a high variation frequency in all components. This situation lasted till the Yangbi </span><i><span style="font-family:Verdana;">M</span></i><sub><span style="font-family:Verdana;">S</span></sub><span style="font-family:Verdana;"> 6.4 earthquake happened on May 21, 2021, more than 300 km away from these two ULF observing stations. Totally, the ULF magnetic emissions had been characterized by a synchronous variation in all components at two observing stations.
文摘Suspended and waterborne polyurethane immobilized nitrifying bacteria have been adopted for evaluating the effects of environmental changes, such as temperature, dissolved oxygen （DO） concentration and pH, on nitrification characteristics under conditions of low ammonia concentrations. The results showed that nitrification was prone to complete with increasing pH, DO and temperature. Sensitivity analysis demonstrated the effects of temperature and pH on nitrification feature of suspended bacteria were slightly greater than those of immobilized nitrifying bacteria. Immobilized cells could achieve complete nitrification at low ammonia concentrations when DO was sufficient. Continuous experiments were carried out to discuss the removal of ammonia nitrogen from synthetic micropollute source water with the ammonia concentration of about 1mg/L using immobilized nitrifying bacteria pellets in an up-flow inner circulation reactor under different hydraulic retention times （HRT）. The continuous removal rate remains above 80% even under HRT 30 min. The results verified that the waterborne polyurethane immobilized nitrifying bacteria pellets had great potential applications for micro-pollution source water treatment.
文摘The damage effect assessment of anti-ship missiles combines system science and weapon science,which can provide reference for the assessment of battlefield damage situation.In order to solve the difficulty of heterogeneous data aggregation and the difficulty in constructing the mapping between factors and damage effect,this paper analyzes the specific damage process of the anti-ship missile to the ship,and proposes a synthetic Evidential Reasoning(ER)–Adaptive Neural Fuzzy Inference System(ANFIS)to assess the damage effect.To solve the problem of fuzziness and uncertainty of criteria in the assessment process,the belief structure model is used to transform qualitative and quantitative information into a unified mathematical structure,and ER algorithm is used to fuse the information of lower-level criteria.In order to solve the problem of fuzziness and uncertainty of the information contained in the first-level variables,and the strong non-linear characteristics of the mapping between first-level variables and damage effect,the ANFIS with selfadaptation and self-learning is constructed.The map between the three first-level variables and damage effect is established,and the interaction process of the various factors in the damage effect assessment are clear.Sensitivity analysis shows that assessment model has good stability.The result analysis and comparative analysis show that the process proposed in this paper can effectively assess the damage effect of anti-ship missiles,and all criteria data are objective and comparable.
基金supported by grants from the National Science and Technology Major Project(No.2017ZX10202102-006-002 to L.Y.)the National Natural Science Fund for Distinguished Young Scholars(No.31825011 to L.Y.)the National Science and Technology Major Project(2016ZX09J16105-001-002 to L.Y.).
文摘COVID-19 patients exhibit differential disease severity after SARS-CoV-2 infection.It is currently unknown as to the correlation between the magnitude of neutralizing antibody(NAb)responses and the disease severity in COVID-19 patients.In a cohort of 59 recovered patients with disease severity including severe,moderate,mild,and asymptomatic,we observed the positive correlation between serum neutralizing capacity and disease severity,in particular,the highest NAb capacity in sera from the patients with severe disease,while a lack of ability of asymptomatic patients to mount competent NAbs.Furthermore,the compositions of NAb subtypes were also different between recovered patients with severe symptoms and with mild-tomoderate symptoms.These results reveal the tremendous heterogeneity of SARS-CoV-2-specific NAb responses and their correlations to disease severity,highlighting the needs of future vaccination in COVID-19 patients recovered from asymptomatic or mild illness.
基金This study was supported by grants from the National Key Research Development Plan(No.2016YFA0502202 to L.Y.)the Open Research Fund of State Key Laboratory of Veterinary Biotechnology(No.SKLVBF2018XX to L.Ye)+3 种基金the National Natural Science Foundation of China(No.31825011 to L.Y.No.31800742 to Q.T.No.31700774 to L.Xu and No.31470870 to X.Z.)Chicago Biomedical Consortium with support from the Searle Funds at The Chicago Community Trust(to J.H.).
文摘Epigenetic modifications to histones dictate the differentiation of naïve CD4^(+) T cells into different subsets of effector T helper(TH)cells.The histone methyltransferase enhancer of zeste homolog 2(EZH2)has been implicated in the mechanism regulating the differentiation of TH1,TH2 and regulatory T(Treg)cells.However,whether and how EZH2 regulates follicular helper T(TFH)cell differentiation remain unknown.Using a mouse model of acute lymphocytic choriomeningitis virus(LCMV)infection,we observed abundant EZH2 expression and associated H3K27me3 modifications preferentially in the early committed virus-specific TFH cells compared to those in TH1 cells.Ablation of EZH2 in LCMV-specific CD4^(+) T cells leads to a selective impairment of early TFH cell fate commitment,but not late TFH differentiation or memory TFH maintenance.Mechanistically,EZH2 specifically stabilizes the chromatin accessibility of a cluster of genes that are important for TFH fate commitment,particularly B cell lymphoma 6(Bcl6),and thus directs TFH cell commitment.Therefore,we identified the chromatin-modifying enzyme EZH2 as a novel regulator of early TFH differentiation during acute viral infection.
基金This study was supported by grants from the National Natural Science Foundation of China(No.31800763 to Y.Z.)Special Grant from Postdoctoral Science Foundation of China(No.2020T130791 to Y.Z.)the National Key Research and Development Plan of China(No.2016YFA0502202 to L.Y).
文摘The efficient induction and long-term persistence of pathogen-specific memory CD8 T cells are pivotal to rapidly curb the reinfection.Recent studies indicated that long-noncoding RNAs expression is highly cell-and stage-specific during T cell development and differentiation,suggesting their potential roles in T cell programs.However,the key lncRNAs playing crucial roles in memory CD8 T cell establishment remain to be clarified.Through CD8 T cell subsets profiling of lncRNAs,this study found a key lncRNA-Snhgl with the conserved naivehl-effectorlo-memoryh,expression pattern in CD8 T cells of both mice and human,that can promote memory formation while impeding effector CD8 in acute viral infection.Further,Snhgl was found interacting with the conserved vesicle trafficking protein Vps13D to promote IL-7Ra membrane location specifically.With the deep mechanism probing,the results show Snhgl-Vps13D regulated IL-7 signaling with its dual effects in memory CD8 generation,which not just because of the sustaining role of STAT5-BCL-2 axis for memory survival,but more through the STAT3-TCF1-Blimp1 axis for transcriptional launch program of memory differentiation.Moreover,we performed further study with finding a similar high-low-high expression pattern of human SNHG1A/PS13D/IL7R/TCF7 in CD8 T cell subsets from PBMC samples of the convalescent COVID-19 patients.The central role of Snhgl-Vps13D-IL-7R-TCF1 axis in memory CD8 establishment makes it a potential target for improving the vaccination effects to control the ongoing pandemic.
基金supported by a grant from the NHC Key laboratory of Enteric Pathogenic Microbiology(Jiangsu Provincial Center for Disease Control and Prevention,EM202303)Guizhou Province Science and Technology Plan Project(Grant No.QKH[2023]008)+3 种基金the Science Foundation of Jiangsu Province Health Department(ZDB2020014)National Natural Science Foundation of China(82002108)Science and Technology Program of Suzhou(SKYD2023050)Suzhou Municipal Health Commission(KJXW2023061).
文摘Acinetobacter baumannii(A.baumannii)poses a serious public health challenge due to its notorious antimicrobial resistance,particularly carbapenem-resistant A.baumannii(CRAB).In this study,we isolated a virulent phage,named P1068,from medical wastewater capable of lysing CRAB,primarily targeting the K3 capsule type.Basic characterization showed that P1068 infected the A.baumannii ZWAb014 with an optimal MOI of 1,experienced a latent period of 10 min and maintained stability over a temperature range of 4–37C and pH range of 3–10.Phylogenetic and average nucleotide identity analyses indicate that P1068 can be classified as a novel species within the genus Obolenskvirus of the Caudoviricetes class as per the most recent virus classification released by the International Committee on Taxonomy of Viruses(ICTV).Additionally,according to classical morphological classification,P1068 is identified as a T4-like phage(Myoviridae).Interestingly,we found that the tail fiber protein(TFP)of P1068 shares 74%coverage and 88.99%identity with the TFP of a T7-like phage(Podoviridae),AbKT21phiIII(NC_048142.1).This finding suggests that the TFP gene of phages may undergo horizontal transfer across different genera and morphologies.In vitro antimicrobial assays showed that P1068 exhibited antimicrobial activity against A.baumannii in both biofilm and planktonic states.In mouse models of intraperitoneal infection,P1068 phage protected mice from A.baumannii infection and significantly reduced bacterial loads in various tissues such as the brain,blood,lung,spleen,and liver compared to controls.In conclusion,this study demonstrates that phage P1068 might be a potential candidate for the treatment of carbapenem-resistant and biofilmforming A.baumannii infections,and expands the understanding of horizontal transfer of phage TFP genes.
基金supported by grants from the National Natural Science Fund for Distinguished Young Scholars(No.31825011 to L.Y.)the Chongqing Special Research Project for Novel Coronavirus Pneumonia Prevention and Control(No.cstc2020jscx-2 to L.Y.,No.cstc2020jscx-fyzx0074 to Y.C.,cstc2020jscx-fyzx0135 to Y.C.).
文摘According to the World Health Organization(WHO)newly updated situation report on March 18th,2020,the coronavirus disease 2019(COVID-19)pandemic has confirmed 191,127 cases and claimed 7807 deaths worldwide.1 The etiological agent of COVID-19 has been identified as a novel coronavirus,the severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),belonging to Sarbecovirus subgenus(genus Betacoronavirus,family Coronaviridae)and showing 79.6 and 96.2%sequence identity in nucleotide to SARS-CoV and a bat coronavirus(BatCoV RaTG13),respectively.2–4 Like SARS-CoV infection,a substantial fraction of COVID-19 patients exhibits severe respiratory symptoms and has to be hospitalized in intensive care unit.5–8 Although the mortality rate of COVID-19 is significantly lower than that of SARS-CoV infection,SARS-CoV-2 shows much higher human-to-human transmission rate,rapidly leading to a global pandemic declared by WHO on March 11th,2020.
基金financially supported by the National Natural Science Foundation of China(No.51978494)the Science and Technology Innovation Program Project of Shanghai City Investment Co.,Ltd.(No.CTKY-ZDXM-2020-012).
文摘Short-term water demand forecasting provides guidance on real-time water allocation in the water supply network, which help water utilities reduce energy cost and avoid potential accidents. Although a variety of methods have been proposed to improve forecast accuracy, it is still difficult for statistical models to learn the periodic patterns due to the chaotic nature of the water demand data with high temporal resolution. To overcome this issue from the perspective of improving data predictability, we proposed a hybrid Wavelet-CNN-LSTM model, that combines time-frequency decomposition characteristics of Wavelet Multi-Resolution Analysis (MRA) and implement it into an advanced deep learning model, CNN-LSTM. Four models - ANN, Conv1D, LSTM, GRUN - are used to compare with Wavelet-CNN-LSTM, and the results show that Wavelet-CNN-LSTM outperforms the other models both in single-step and multi-steps prediction. Besides, further mechanistic analysis revealed that MRA produce significant effect on improving model accuracy.
文摘Bacteria play an important role in the formation of primary Common Bile Duct(CBD)stones.However,the composition and function of the microbiota of bile duct in patients with primary CBD stones remained to be explored.We utilized the 16S rRNA gene high-throughput sequencing technology to analyze the microbial diversity and community composition of biliary and duodenal microbiota in 15 patients with primary CBD stones and 4 patients without biliary tract diseases.Alpha diversity analysis showed that the microbiota richness was similar in bile and intestinal fluid;Beta diversity analysis showed that there were differences in the composition between biliary microbiota and the duodenal microbiota,but the abundance of the main groups showed similarities.The composition of the biliary microbiota from gallstone patients was more complex,as was the duodenal microbiota.Proteobacteria and Firmicutes were the dominant bacteria at phylum level,accounting for at least 75%of the total reads in each subgroup.Pseudomonas and EscherichiaShigella were the major genus among subgroups,but Escherichia-Shigella had increased abundance in duodenal microbiota with primary choledocholithiasis,which may play an important role in stone formation.It is noteworthy that Clostridiumsensu_stricto,Lachnospiraceae_UCG-008,Butyrivibrio and Roseburia which could produce short chain fatty acids(SCFAs),were significantly decreased in biliary microbiota with primary CBD stones(p<0.05).Our study provided new insights into the compositional of normal biliary microbiota.The micro-ecology of biliary and duodenal in patients with stones is complex and closely related,and there is a potential for dysbacteriosis.The decrease in abundance of certain major acid-producing bacteria affects the health of the biliary tract and thus leads to the formation of stones.
基金This work was supported by grants from the National Science and Technology Major Project(No.2017ZX10202102-006-002 to L.Y.)National Key Research Development Plan(No.2016YFA0502202 to L.Ye)+1 种基金the National Natural Science Fund for Distinguished Young Scholars(No.31825011 to L.Y.)the Chongqing Special Research Project for Novel Coronavirus Pneumonia Prevention and Control(No.cstc2020jscx-2 to L.Y.,No.cstc2020jscx-fyzx0074 to Y.C.,ocstc2020jscx-fyzx0135 to Y.C.).
文摘The adaptive immunity that protects patients from coronavirus disease 2019(COVID-19),caused by severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),is not well characterized.In particular,the asymptomatic patients have been found to induce weak and transient SARS-CoV-2 antibody responses,but the underlying mechanisms remain unknown;meanwhile,the protective immunity that guide the recovery of these asymptomatic patients is elusive.Here,we characterized SARS-CoV-2-specific B-cell and T-cell responses in 10 asymptomatic patients and 64 patients with other disease severity(mild,n=10,moderate,n=32,severe,n=12)and found that asymptomatic or mild symptomatic patients failed to mount virus-specific germinal center(GC)B cell responses that result in robust and prolonged humoral immunity,assessed by GC response indicators including follicular helper T(TFH)cell and memory B cell responses as well as serum CXCL13 levels.Alternatively,these patients mounted potent virus-specific TH1 and CD8+T cell responses.In sharp contrast,patients of moderate or severe disease induced vigorous virus-specific GC B cell responses and associated TFH responses;however,the virus-specific TH1 and CD8+T cells were minimally induced in these patients.These results,therefore,uncovered the protective immunity in asymptomatic patients and also revealed the strikingly dichotomous and incomplete humoral and cellular immune responses in COVID-19 patients with different disease severity,providing important insights into rational design of effective COVID-19 vaccines.
基金supported by the National Science Foundation of China (Grant Nos. 50973117, 21074139, 50625312, U0634004 and 20721061)the 973 Program (Nos. 2007CB936403,2009CB930400, 2011CB932303, and 2011CB808400)
文摘Self-assembly of latex particles is of great importance for fabricating various functional colloidal crystals. In this paper, we review recent research on the self-assembly of latex particles for colloidal crystals, covering the assembly forces and various assembly approaches of latex particles, including self-assembly by gravity sedimentation, vertical deposition, physical confinement, electric field, and magnetic field. Furthermore, some simple methods for assembling latex particles such as spin coating, spray coating, and printing are also summarized.
基金the National Key Research and Development Program of China(no.2021YFC-2300602 to LY)the Key Program of the National Natural Science Foundation of China(no.32030041 to LY)+2 种基金the National Science Foundation for Outstanding Young Scholars of China(no.82122028 to LX)the National Natural Science Foundation of China(no.82173094 to LX,no.31900643 to QH)the Chongqing Postdoctoral Science Foundation Project(no.cstc2021jcyj-bshX0232 to QL).
文摘The functional exhaustion of CD8^(+)T cells represents a fundamental hallmark of chronic viral infection and cancer and,in both scenarios,is driven by prolonged exposure to persistent cognate antigens in the context of an immunoinhibitory microenvironment.Exhausted CD8^(+)T cells upregulate the expression of a wide diversity of coinhibitory immunoreceptors(also referred to as immune checkpoint receptors),such as PD-1,Tim-3,LAG-3,and TIGIT.Concomitantly,exhausted CD8^(+)T cells lose their potential to differentiate into functional memory cells and are characterized by hierarchical loss of effector function,leading to compromised tumor control and viral eradication[1,2].
