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An overview of detecting gene-trait associations by integrating GWAS summary statistics and eQTLs 被引量:1
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作者 Yang Zhang Mengyao wang +7 位作者 Zhenguo Li Xuan Yang Keqin Li Ao Xie Fang Dong shihan wang Jianbing Yan Jianxiao Liu 《Science China(Life Sciences)》 SCIE CAS CSCD 2024年第6期1133-1154,共22页
Detecting genes that affect specific traits(such as human diseases and crop yields)is important for treating complex diseases and improving crop quality.A genome-wide association study(GWAS)provides new insights and d... Detecting genes that affect specific traits(such as human diseases and crop yields)is important for treating complex diseases and improving crop quality.A genome-wide association study(GWAS)provides new insights and directions for understanding complex traits by identifying important single nucleotide polymorphisms.Many GWAS summary statistics data related to various complex traits have been gathered recently.Studies have shown that GWAS risk loci and expression quantitative trait loci(e QTLs)often have a lot of overlaps,which makes gene expression gradually become an important intermediary to reveal the regulatory role of GWAS.In this review,we review three types of gene-trait association detection methods of integrating GWAS summary statistics and e QTLs data,namely colocalization methods,transcriptome-wide association study-oriented approaches,and Mendelian randomization-related methods.At the theoretical level,we discussed the differences,relationships,advantages,and disadvantages of various algorithms in the three kinds of gene-trait association detection methods.To further discuss the performance of various methods,we summarize the significant gene sets that influence highdensity lipoprotein,low-density lipoprotein,total cholesterol,and triglyceride reported in 16 studies.We discuss the performance of various algorithms using the datasets of the four lipid traits.The advantages and limitations of various algorithms are analyzed based on experimental results,and we suggest directions for follow-up studies on detecting gene-trait associations. 展开更多
关键词 gene-trait association GWAS EQTL COLOCALIZATION transcriptome-wide association study(TWAS) Mendelian randomization(MR)
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Upgrading waste NO_(x) into amino acids via electrocatalysis on Co nanoparticles encapsulated in hollow carbon nanofibers
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作者 Jiahui Xian Kaixing Cai +2 位作者 Peisen Liao shihan wang Guangqin Li 《Science China Chemistry》 SCIE EI CAS CSCD 2024年第6期1946-1952,共7页
Electrocatalytic conversion of waste nitrogen oxide(NO_(x))into value-added nitrogenous chemicals,especially amino acid,is an emerging strategy to alleviate NO_(x)pollution.However,this process suffers from the coexis... Electrocatalytic conversion of waste nitrogen oxide(NO_(x))into value-added nitrogenous chemicals,especially amino acid,is an emerging strategy to alleviate NO_(x)pollution.However,this process suffers from the coexistence of multiple competitive reactions leading to complex product distribution and low efficiency,and thus the rational design and modulation of efficient catalysts remains a formidable challenge.Herein,well-designed Co nanoparticles encapsulated in hollow carbon nanofiber(CoHCNF)were constructed to promote the amino acid electrosynthesis via dealing waste NO_(x)coupling with biomass-derived keto acids.Ascribed to the rapid reactant diffusion,electron transport and efficient contact with abundant accessible Co catalytic sites stemmed from the unique hollow nanotubular structure,Co-HCNF manifested impressive glycine synthesis performance in one-pot adopting NO as the nitrogen source with Faradaic efficiency(FE)of 41.7%and a corresponding yield rate of 222.3μmol h^(-1)as well as 120 h robust stability.Interestingly,it also demonstrates an excellent performance with the FE of 42.8%for NO_(3)~-solution as the nitrogen source.Specially,this strategy displays a broad universality for the synthesis of other amino acids.This work not only highlights the importance of hollow-structuring electrocatalyst towards upgrading wasted NO_(x)species into amino acids,but also promotes the further development of electrosynthetic systems for high-valued N-containing organic chemicals. 展开更多
关键词 ELECTROCATALYSIS NO_(x)reduction amino acid porous materials hollow structure
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Recent advances of two-dimensional metal-organic frameworks in alkaline electrolysis water for hydrogen production 被引量:8
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作者 Peisen Liao Jiawei Kang +5 位作者 Yicheng Zhong Runan Xiang shihan wang Suisheng Li Xianlong Liu Guangqin Li 《Science China Chemistry》 SCIE EI CAS CSCD 2023年第7期1924-1939,共16页
Hydrogen evolution production via electrolysis of water in alkaline solution is a promising mean of industrial hydrogen production.However,inefficiency and high cost restrict its industrialization development.Based on... Hydrogen evolution production via electrolysis of water in alkaline solution is a promising mean of industrial hydrogen production.However,inefficiency and high cost restrict its industrialization development.Based on extensive studies of experimental and theoretical investigations,two-dimensional(2D)materials are promising substitute of noble metals for hydrogen evolution reaction(HER)with low cost and high-efficiency.Herein,recent progress in 2D metal-organic frameworks(MOFs)for HER in alkaline electrolyte is systematically discussed and summarized.This review describes the strategies about how to design and optimize the structure of 2D MOF-based materials as HER electrocatalysts with well performance and aims to provide potential avenues for industrial hydrogen production.Additionally,the challenges and future directions ahead in this field are also proposed. 展开更多
关键词 hydrogen production 2D materials electroctalyst ALKALINE metal-organic frameworks
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Identification of anti-inflammatory components in Panax ginseng of Sijunzi Decoction based on spectrum-effect relationship 被引量:5
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作者 Hong Kan Dongxue Zhang +5 位作者 Weijia Chen shihan wang Zhongmei He Shifeng Pang Shuai Qu Yingping wang 《Chinese Herbal Medicines》 CAS 2023年第1期123-131,共9页
Objective: This study aimed to identify the main medicinal active components of Panax ginseng(P. ginseng) in the compatibility environment of clinical application. For this purpose, the anti-inflammatory ingredients o... Objective: This study aimed to identify the main medicinal active components of Panax ginseng(P. ginseng) in the compatibility environment of clinical application. For this purpose, the anti-inflammatory ingredients of P. ginseng were investigated based on its therapeutic effect in Sijunzi Decoction(SJD) which is a widely used traditional Chinese formula.Methods: The fingerprints of 10 batches of SJD consisting of different sources of P. ginseng were established by UPLC technique to investigate the chemical components. At the same time, the antiinflammatory effects of these components were evaluated by dextran sulfate sodium-induced ulcerative colitis mouse model. Grey relational analysis was applied to explore the correlation degree between fingerprints and anti-inflammatory effects in SJD. Lipopolysaccharide-stimulated RAW264.7 murine macrophages were established to evaluate the anti-inflammatory action of the screened effective substances of P. ginseng.Results: According to grey relational analysis, notoginsenoside R1, ginsenoside Rg2 and ginsenoside Rb3of P. ginseng were the major anti-inflammatory contributions in SJD. They had been proven to be closely associated with the anti-inflammatory process of SJD and displayed a close effect compared with SJD by LPS-stimulated RAW264.7 murine macrophages.Conclusion: Our work provides a general strategy for exploring the pharmacological ingredients of P. ginseng in traditional Chinese formulas which is beneficial for establishing the quality standards of traditional herbs in traditional Chinese medicine prescription based on their clinical therapeutic effect. 展开更多
关键词 ANTI-INFLAMMATION GINSENOSIDES Panax ginseng C.A.Mey Sijunzi Decoction spectrum-effect relationship ulcerative colitis
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Carbon quantum dots/BiVO_(4)S-scheme piezo-photocatalysts improved carrier separation for efficient antibiotic removal
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作者 Mingsong Lv shihan wang Haifeng Shi 《Journal of Materials Science & Technology》 2024年第34期21-31,共11页
Reasonable design of an efficient S-scheme photocatalyst remains an ongoing challenge due to the limita-tion of interfacial charge separation efficiency.Herein,CQDs/BiVO_(4)S-scheme heterojunction with Bi-O-C bond was... Reasonable design of an efficient S-scheme photocatalyst remains an ongoing challenge due to the limita-tion of interfacial charge separation efficiency.Herein,CQDs/BiVO_(4)S-scheme heterojunction with Bi-O-C bond was synthesized by introducing carbon quantum dots(CQDs)growth on BiVO_(4)piezo-photocatalyst and absorbed visible light up to 750 nm.Under light+ultrasonic conditions,the reaction rate con-stant(k)of BVO/C-0.10 reached 0.0517 min^(−1)on tetracycline(TC)degradation,which was 2.24 and 4.04 times higher than those of BiVO_(4)and CQDs,respectively.The enhanced performance was attributed to the improved efficiency of the photogenerated carrier separation,originating from the combination of piezoelectric effect and S-scheme heterojunction with Bi-O-C bond.The Bi-O-C bond at the CQDs(3-8 nm)and BiVO_(4)interfaces connected the two semiconductor materials and provided an atomic-level interface channel for carrier migration.The piezoelectric properties of the composites were investigated by piezo−response force microscopy(PFM).Based on Mott−Schottky curves,X-ray photoelectron spec-troscopy(XPS),and scavenging experiments,the possible piezo-photocatalytic mechanism was proposed in combination with the band structures and characteristics of CQDs and BiVO_(4).This work furnishes unique insights into developing efficient S-scheme piezo-photocatalysts for purifying wastewater. 展开更多
关键词 Carbon quantum dots BiVO_(4) Piezo-photocatalysis S-scheme heterojunction Tetracycline
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