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Analysis of Differential Gene Expression and Core Canonical Pathways Involved in the Epithelial to Mesenchymal Transition of Triple Negative Breast Cancer Cells by Ingenuity Pathway Analysis
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作者 Elizabeth Cagle Brent Lake +10 位作者 Anasua Banerjee jazmine cuffee Narendra Banerjee Darla Gilmartin Makaiyah Liverman Shennel Brown Erik Armstrong Santanu Bhattacharya Somiranjan Ghosh Tanmoy Mandal Hirendra Banerjee 《Computational Molecular Bioscience》 2023年第2期21-34,共14页
Triple Negative Breast Cancer (TNBC) is a malignant form of cancer with very high mortality and morbidity. Epithelial to Mesenchymal Transition (EMT) is the most common pathophysiological change observed in cancer cel... Triple Negative Breast Cancer (TNBC) is a malignant form of cancer with very high mortality and morbidity. Epithelial to Mesenchymal Transition (EMT) is the most common pathophysiological change observed in cancer cells of epithelial origin that promotes metastasis, drug resistance and cancer stem cell formation. Since the information regarding differential gene expression in TNBC cells and cell signaling events leading to EMT is limited, this investigation was done by comparing transcriptomic data generated by RNA isolation and sequencing of a EMT model TNBC cell line in comparison to regular TNBC cells. RNA sequencing and Ingenuity Pathway Software Analysis (IPA) of the transcriptomic data revealed several upregulated and downregulated gene expressions along with novel core canonical pathways including Sirtuin signaling, Oxidative Phosphorylation and Mitochondrial dysfunction events involved in EMT changes of the TNBC cells. 展开更多
关键词 Triple Negative Breast Cancer Epithelial to Mesenchymal Transition Core Canonical Pathways
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A Study of Differential Gene Expression and Core Canonical Pathways Involved in Rhenium Ligand Treated Epithelial Mesenchymal Transition (EMT) Induced A549 Lung Cancer Cell Lines by INGENUITY Software System
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作者 Christopher Krauss Chelsey Aurelus +15 位作者 Kayla Johnston Joseph Hedley Satyendra Banerjee Sarah Wisniewski Quentin Reaves Khadimou Dia Shenell Brown Victoria Bartlet Sheritta Gavin jazmine cuffee Narendra Banerjee Kuldeep Rawat Santosh Mandal Zahidur Abedin Somiranjan Ghosh Hirendra Banerjee 《Computational Molecular Bioscience》 2022年第1期12-19,共8页
Rhenium compounds have shown anti-cancer properties against many different types of cancer cell lines;however, the cellular signaling mechanisms involved in the cytotoxic properties of rhenium-based compounds were nev... Rhenium compounds have shown anti-cancer properties against many different types of cancer cell lines;however, the cellular signaling mechanisms involved in the cytotoxic properties of rhenium-based compounds were never deciphered or reported. In this manuscript, we report the results of an investigation done by RNA sequencing of rhenium treated A549 lung cancer cell lines along with an untreated vehicular control, analyzed by the Ingenuity Pathway Analysis (IPA) software system to decipher the core canonical pathways involved in rhenium induced cancer cell death. A549 EMT lung cancer cell lines were treated with rhenium ligand (Tricarbonylperrhenato(bathocuproine)rhenium(I), PR7) for seven days along with vehicular control. RNA was isolated from the treated and control cells and sequenced by a commercial company (PrimBio Corporation). The RNA sequencing data was analyzed by the INGNUITY software system and the core canonical pathways involved with differential gene expression were identified. Our report is showing that there are several cellular pathways involved in inducing cell death by rhenium-based compound PR7. 展开更多
关键词 Rhenium Compounds Lung Cancer EPITHELIAL
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